Herdmanine B

Details

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Internal ID 3908990c-6168-4089-a06a-be9a6ae910fd
Taxonomy Benzenoids > Benzene and substituted derivatives > Benzoic acids and derivatives > Benzamides > Hippuric acids and derivatives > Hippuric acids
IUPAC Name (2R)-5-(diaminomethylideneamino)-2-[[4-(6-hydroxy-1H-indole-3-carbonyl)oxybenzoyl]amino]pentanoic acid
SMILES (Canonical) C1=CC(=CC=C1C(=O)NC(CCCN=C(N)N)C(=O)O)OC(=O)C2=CNC3=C2C=CC(=C3)O
SMILES (Isomeric) C1=CC(=CC=C1C(=O)N[C@H](CCCN=C(N)N)C(=O)O)OC(=O)C2=CNC3=C2C=CC(=C3)O
InChI InChI=1S/C22H23N5O6/c23-22(24)25-9-1-2-17(20(30)31)27-19(29)12-3-6-14(7-4-12)33-21(32)16-11-26-18-10-13(28)5-8-15(16)18/h3-8,10-11,17,26,28H,1-2,9H2,(H,27,29)(H,30,31)(H4,23,24,25)/t17-/m1/s1
InChI Key KWPPWWBPUGGYLA-QGZVFWFLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C22H23N5O6
Molecular Weight 453.40 g/mol
Exact Mass 453.16483347 g/mol
Topological Polar Surface Area (TPSA) 193.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 1.33
H-Bond Acceptor 6
H-Bond Donor 6
Rotatable Bonds 9

Synonyms

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CHEBI:69267
Q27137606

2D Structure

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2D Structure of Herdmanine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7998 79.98%
Caco-2 - 0.9015 90.15%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.6858 68.58%
OATP2B1 inhibitior - 0.8585 85.85%
OATP1B1 inhibitior + 0.8667 86.67%
OATP1B3 inhibitior + 0.9421 94.21%
MATE1 inhibitior - 0.6009 60.09%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.5999 59.99%
P-glycoprotein inhibitior + 0.5797 57.97%
P-glycoprotein substrate + 0.6877 68.77%
CYP3A4 substrate + 0.6441 64.41%
CYP2C9 substrate - 0.8003 80.03%
CYP2D6 substrate - 0.8548 85.48%
CYP3A4 inhibition - 0.8414 84.14%
CYP2C9 inhibition - 0.7886 78.86%
CYP2C19 inhibition - 0.7898 78.98%
CYP2D6 inhibition - 0.8629 86.29%
CYP1A2 inhibition - 0.6942 69.42%
CYP2C8 inhibition + 0.6951 69.51%
CYP inhibitory promiscuity - 0.8378 83.78%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.6109 61.09%
Eye corrosion - 0.9890 98.90%
Eye irritation - 0.9651 96.51%
Skin irritation - 0.8042 80.42%
Skin corrosion - 0.9403 94.03%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6452 64.52%
Micronuclear + 0.7600 76.00%
Hepatotoxicity - 0.6232 62.32%
skin sensitisation - 0.8673 86.73%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.5867 58.67%
Acute Oral Toxicity (c) III 0.5986 59.86%
Estrogen receptor binding + 0.7566 75.66%
Androgen receptor binding + 0.8522 85.22%
Thyroid receptor binding + 0.5788 57.88%
Glucocorticoid receptor binding + 0.6459 64.59%
Aromatase binding + 0.5424 54.24%
PPAR gamma + 0.6937 69.37%
Honey bee toxicity - 0.7981 79.81%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.5363 53.63%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.66% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 97.67% 99.17%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.93% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.60% 94.45%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 96.31% 82.86%
CHEMBL2535 P11166 Glucose transporter 94.23% 98.75%
CHEMBL2179 P04062 Beta-glucocerebrosidase 93.02% 85.31%
CHEMBL2581 P07339 Cathepsin D 91.79% 98.95%
CHEMBL1255126 O15151 Protein Mdm4 89.44% 90.20%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 89.11% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.39% 95.56%
CHEMBL1951 P21397 Monoamine oxidase A 88.02% 91.49%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 87.73% 90.71%
CHEMBL3232685 O00257 E3 SUMO-protein ligase CBX4 85.81% 93.00%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 84.90% 92.67%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.61% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.00% 86.33%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 83.67% 93.24%
CHEMBL4581 P52732 Kinesin-like protein 1 82.78% 93.18%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.40% 95.89%
CHEMBL4208 P20618 Proteasome component C5 82.02% 90.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.69% 96.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.02% 93.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 53493852
LOTUS LTS0120024
wikiData Q27137606