Herbicidin L

Details

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Internal ID 5d1766c5-c4ca-4aa7-a59f-6cb2d246fef4
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Glycosylamines
IUPAC Name methyl (1S,3S,4R,5R,7R,9R,11S,12S,13R)-5-(6-aminopurin-9-yl)-1,13-dihydroxy-12-[(E)-2-(hydroxymethyl)but-2-enoyl]oxy-4-methoxy-2,6,10-trioxatricyclo[7.4.0.03,7]tridecane-11-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H29N5O11/c1-4-9(6-29)21(31)38-14-16(22(32)35-3)37-11-5-10-13(39-23(11,33)17(14)30)15(34-2)20(36-10)28-8-27-12-18(24)25-7-26-19(12)28/h4,7-8,10-11,13-17,20,29-30,33H,5-6H2,1-3H3,(H2,24,25,26)/b9-4+/t10-,11-,13+,14-,15-,16+,17-,20-,23-/m1/s1
InChI Key UVLIBEDEPMXKCR-ZDASJGCESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H29N5O11
Molecular Weight 551.50 g/mol
Exact Mass 551.18635676 g/mol
Topological Polar Surface Area (TPSA) 220.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -2.05
H-Bond Acceptor 16
H-Bond Donor 4
Rotatable Bonds 6

Synonyms

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CHEMBL4281598

2D Structure

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2D Structure of Herbicidin L

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6918 69.18%
Caco-2 - 0.8558 85.58%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Nucleus 0.2842 28.42%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8900 89.00%
OATP1B3 inhibitior + 0.9384 93.84%
MATE1 inhibitior - 0.9212 92.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.7471 74.71%
P-glycoprotein inhibitior + 0.6075 60.75%
P-glycoprotein substrate + 0.7043 70.43%
CYP3A4 substrate + 0.6749 67.49%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8793 87.93%
CYP3A4 inhibition - 0.8985 89.85%
CYP2C9 inhibition - 0.8319 83.19%
CYP2C19 inhibition - 0.8671 86.71%
CYP2D6 inhibition - 0.9125 91.25%
CYP1A2 inhibition - 0.8564 85.64%
CYP2C8 inhibition + 0.5490 54.90%
CYP inhibitory promiscuity - 0.9113 91.13%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5094 50.94%
Eye corrosion - 0.9863 98.63%
Eye irritation - 0.9438 94.38%
Skin irritation - 0.7722 77.22%
Skin corrosion - 0.9314 93.14%
Ames mutagenesis + 0.5168 51.68%
Human Ether-a-go-go-Related Gene inhibition - 0.6418 64.18%
Micronuclear + 0.9500 95.00%
Hepatotoxicity - 0.5431 54.31%
skin sensitisation - 0.8571 85.71%
Respiratory toxicity + 0.9333 93.33%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9750 97.50%
Nephrotoxicity - 0.7900 79.00%
Acute Oral Toxicity (c) III 0.6266 62.66%
Estrogen receptor binding + 0.7793 77.93%
Androgen receptor binding + 0.5926 59.26%
Thyroid receptor binding + 0.6310 63.10%
Glucocorticoid receptor binding + 0.7070 70.70%
Aromatase binding + 0.6872 68.72%
PPAR gamma + 0.6838 68.38%
Honey bee toxicity - 0.7538 75.38%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity + 0.8100 81.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.23% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.92% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.41% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.24% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.96% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.36% 94.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 88.40% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.24% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 87.82% 94.73%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 87.11% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.04% 89.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.48% 96.00%
CHEMBL221 P23219 Cyclooxygenase-1 84.85% 90.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.56% 99.23%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.14% 99.17%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 83.94% 95.48%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 83.25% 80.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.94% 95.56%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 82.22% 94.97%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 82.08% 82.50%
CHEMBL2243 O00519 Anandamide amidohydrolase 81.59% 97.53%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.07% 92.86%
CHEMBL4040 P28482 MAP kinase ERK2 80.92% 83.82%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589926
LOTUS LTS0145069
wikiData Q105279947