Harmalinic acid

Details

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Internal ID 29cdd6af-4efe-447a-aab9-3099e8581219
Taxonomy Alkaloids and derivatives > Harmala alkaloids
IUPAC Name 7-methoxy-4,9-dihydro-3H-pyrido[3,4-b]indole-1-carboxylic acid
SMILES (Canonical) COC1=CC2=C(C=C1)C3=C(N2)C(=NCC3)C(=O)O
SMILES (Isomeric) COC1=CC2=C(C=C1)C3=C(N2)C(=NCC3)C(=O)O
InChI InChI=1S/C13H12N2O3/c1-18-7-2-3-8-9-4-5-14-12(13(16)17)11(9)15-10(8)6-7/h2-3,6,15H,4-5H2,1H3,(H,16,17)
InChI Key YORAHDDRCPQNEN-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C13H12N2O3
Molecular Weight 244.25 g/mol
Exact Mass 244.08479225 g/mol
Topological Polar Surface Area (TPSA) 74.70 Ų
XlogP 1.70
Atomic LogP (AlogP) 1.61
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 2

Synonyms

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DTXSID90870552
57498-77-8

2D Structure

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2D Structure of Harmalinic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9596 95.96%
Caco-2 - 0.5630 56.30%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.6286 62.86%
Subcellular localzation Mitochondria 0.8689 86.89%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9306 93.06%
OATP1B3 inhibitior + 0.9405 94.05%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6567 65.67%
BSEP inhibitior - 0.7251 72.51%
P-glycoprotein inhibitior - 0.9754 97.54%
P-glycoprotein substrate - 0.8583 85.83%
CYP3A4 substrate + 0.5653 56.53%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8386 83.86%
CYP3A4 inhibition - 0.6261 62.61%
CYP2C9 inhibition - 0.8035 80.35%
CYP2C19 inhibition - 0.7570 75.70%
CYP2D6 inhibition - 0.5265 52.65%
CYP1A2 inhibition + 0.6756 67.56%
CYP2C8 inhibition - 0.6325 63.25%
CYP inhibitory promiscuity + 0.5736 57.36%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6757 67.57%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.7381 73.81%
Skin irritation - 0.8010 80.10%
Skin corrosion - 0.9405 94.05%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6723 67.23%
Micronuclear + 0.6500 65.00%
Hepatotoxicity + 0.5375 53.75%
skin sensitisation - 0.8675 86.75%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.8193 81.93%
Acute Oral Toxicity (c) III 0.5375 53.75%
Estrogen receptor binding - 0.5130 51.30%
Androgen receptor binding + 0.7120 71.20%
Thyroid receptor binding + 0.5821 58.21%
Glucocorticoid receptor binding + 0.7846 78.46%
Aromatase binding + 0.7723 77.23%
PPAR gamma + 0.7787 77.87%
Honey bee toxicity - 0.9286 92.86%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity - 0.7493 74.93%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.68% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.13% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.61% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.55% 94.45%
CHEMBL2535 P11166 Glucose transporter 91.09% 98.75%
CHEMBL2581 P07339 Cathepsin D 89.96% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.04% 99.17%
CHEMBL1868 P17948 Vascular endothelial growth factor receptor 1 87.45% 96.47%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 86.41% 93.24%
CHEMBL4208 P20618 Proteasome component C5 85.01% 90.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.96% 94.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.74% 92.62%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 84.05% 91.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.74% 95.89%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 83.60% 94.08%
CHEMBL1287628 Q9Y5S8 NADPH oxidase 1 82.25% 95.48%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.10% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Banisteriopsis caapi

Cross-Links

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PubChem 101660925
LOTUS LTS0167981
wikiData Q105351470