Gypensapogenin D

Details

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Internal ID 678c519f-7d55-412e-8758-c48ff5814374
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (2S)-4-[(3S,5R,8R,9R,10R,13R,14R,17S)-3-hydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-(2-methylprop-1-enyl)-2H-furan-5-one
SMILES (Canonical) CC(=CC1C=C(C(=O)O1)C2CCC3(C2CCC4C3(CCC5C4(CCC(C5(C)C)O)C)C)C)C
SMILES (Isomeric) CC(=C[C@H]1C=C(C(=O)O1)[C@H]2CC[C@@]3([C@@H]2CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)O)C)C)C)C
InChI InChI=1S/C30H46O3/c1-18(2)16-19-17-21(26(32)33-19)20-10-14-29(6)22(20)8-9-24-28(5)13-12-25(31)27(3,4)23(28)11-15-30(24,29)7/h16-17,19-20,22-25,31H,8-15H2,1-7H3/t19-,20+,22+,23-,24+,25-,28-,29+,30+/m0/s1
InChI Key WZQVAWQCTICAOL-BJLGVFQSSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H46O3
Molecular Weight 454.70 g/mol
Exact Mass 454.34469533 g/mol
Topological Polar Surface Area (TPSA) 46.50 Ų
XlogP 8.30
Atomic LogP (AlogP) 6.85
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

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CHEMBL1949694
BDBM50423986
(23S)-3beta,23-Dihydroxydammarane-20(22),24-diene-21-oic acid 21,23-lactone

2D Structure

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2D Structure of Gypensapogenin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 - 0.5962 59.62%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.8100 81.00%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8587 85.87%
OATP1B3 inhibitior + 0.9125 91.25%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.9427 94.27%
P-glycoprotein inhibitior + 0.6458 64.58%
P-glycoprotein substrate - 0.8077 80.77%
CYP3A4 substrate + 0.7121 71.21%
CYP2C9 substrate - 0.8032 80.32%
CYP2D6 substrate - 0.8757 87.57%
CYP3A4 inhibition - 0.6073 60.73%
CYP2C9 inhibition - 0.8615 86.15%
CYP2C19 inhibition - 0.6937 69.37%
CYP2D6 inhibition - 0.9481 94.81%
CYP1A2 inhibition - 0.8499 84.99%
CYP2C8 inhibition - 0.6725 67.25%
CYP inhibitory promiscuity - 0.8259 82.59%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5445 54.45%
Eye corrosion - 0.9931 99.31%
Eye irritation - 0.9315 93.15%
Skin irritation + 0.5540 55.40%
Skin corrosion - 0.9342 93.42%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7204 72.04%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.6573 65.73%
skin sensitisation - 0.6710 67.10%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.7051 70.51%
Acute Oral Toxicity (c) III 0.5263 52.63%
Estrogen receptor binding + 0.8435 84.35%
Androgen receptor binding + 0.7872 78.72%
Thyroid receptor binding + 0.6719 67.19%
Glucocorticoid receptor binding + 0.7998 79.98%
Aromatase binding + 0.8007 80.07%
PPAR gamma + 0.7013 70.13%
Honey bee toxicity - 0.6405 64.05%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity + 0.9937 99.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.08% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 93.85% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.76% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.24% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.51% 97.09%
CHEMBL2581 P07339 Cathepsin D 86.28% 98.95%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 85.91% 82.69%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.78% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.18% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.39% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.73% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.38% 89.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 80.98% 90.08%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.72% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Coleostephus myconis
Dahlia pinnata
Gynostemma pentaphyllum
Synotis alata

Cross-Links

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PubChem 57403824
NPASS NPC201406
LOTUS LTS0179774
wikiData Q105323403