Gypensapogenin B

Details

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Internal ID ad79d3a2-c728-4822-820c-cc2307908364
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Oxasteroids and derivatives
IUPAC Name 5-propan-2-ylidene-3-[(1R,3S,6R,7S,10R,11R,16S)-10,11,15,15-tetramethyl-19-oxapentacyclo[14.2.1.02,14.03,11.06,10]nonadec-2(14)-en-7-yl]cyclopent-2-en-1-one
SMILES (Canonical) CC(=C1CC(=CC1=O)C2CCC3(C2CCC4C3(CCC5=C4C6CCC(C5(C)C)O6)C)C)C
SMILES (Isomeric) CC(=C1CC(=CC1=O)[C@H]2CC[C@@]3([C@@H]2CC[C@H]4[C@]3(CCC5=C4[C@H]6CC[C@@H](C5(C)C)O6)C)C)C
InChI InChI=1S/C30H42O2/c1-17(2)20-15-18(16-24(20)31)19-11-13-29(5)21(19)7-8-23-27-22(12-14-30(23,29)6)28(3,4)26-10-9-25(27)32-26/h16,19,21,23,25-26H,7-15H2,1-6H3/t19-,21-,23-,25-,26+,29-,30-/m1/s1
InChI Key NNUMQZNZQGQGCN-AGHUFMIKSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H42O2
Molecular Weight 434.70 g/mol
Exact Mass 434.318480578 g/mol
Topological Polar Surface Area (TPSA) 26.30 Ų
XlogP 6.60
Atomic LogP (AlogP) 7.35
H-Bond Acceptor 2
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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CHEMBL1951708
BDBM50423981

2D Structure

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2D Structure of Gypensapogenin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 + 0.5603 56.03%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.6804 68.04%
OATP2B1 inhibitior - 0.8629 86.29%
OATP1B1 inhibitior + 0.7511 75.11%
OATP1B3 inhibitior + 0.9761 97.61%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9055 90.55%
P-glycoprotein inhibitior + 0.7325 73.25%
P-glycoprotein substrate - 0.7538 75.38%
CYP3A4 substrate + 0.6759 67.59%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8702 87.02%
CYP3A4 inhibition - 0.6973 69.73%
CYP2C9 inhibition - 0.8740 87.40%
CYP2C19 inhibition - 0.5297 52.97%
CYP2D6 inhibition - 0.9347 93.47%
CYP1A2 inhibition - 0.6990 69.90%
CYP2C8 inhibition + 0.5549 55.49%
CYP inhibitory promiscuity - 0.7204 72.04%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5474 54.74%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9438 94.38%
Skin irritation - 0.5905 59.05%
Skin corrosion - 0.9404 94.04%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7768 77.68%
Micronuclear - 0.9400 94.00%
Hepatotoxicity + 0.6102 61.02%
skin sensitisation - 0.5796 57.96%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.6406 64.06%
Acute Oral Toxicity (c) III 0.6408 64.08%
Estrogen receptor binding + 0.8829 88.29%
Androgen receptor binding + 0.7764 77.64%
Thyroid receptor binding + 0.6553 65.53%
Glucocorticoid receptor binding + 0.8552 85.52%
Aromatase binding + 0.7457 74.57%
PPAR gamma + 0.6844 68.44%
Honey bee toxicity - 0.8044 80.44%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9849 98.49%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 24500 nM
IC50
PMID: 23177789

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.43% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.00% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.09% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.57% 94.45%
CHEMBL2581 P07339 Cathepsin D 92.58% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.68% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.79% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.79% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.60% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.17% 97.09%
CHEMBL259 P32245 Melanocortin receptor 4 82.82% 95.38%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.52% 95.89%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 82.33% 85.30%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.00% 93.04%
CHEMBL4208 P20618 Proteasome component C5 81.66% 90.00%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 81.38% 94.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Coleostephus myconis
Dahlia pinnata
Gynostemma pentaphyllum
Synotis alata

Cross-Links

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PubChem 57400364
NPASS NPC190442
ChEMBL CHEMBL1951708
LOTUS LTS0041775
wikiData Q105182323