Gypensapogenin A

Details

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Internal ID d9889c66-af44-4f1b-8111-4e596dd15cad
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Oxasteroids and derivatives
IUPAC Name 5-propan-2-ylidene-2-[(1R,3S,6R,7S,10R,11R,16S)-10,11,15,15-tetramethyl-19-oxapentacyclo[14.2.1.02,14.03,11.06,10]nonadec-2(14)-en-7-yl]cyclopent-2-en-1-one
SMILES (Canonical) CC(=C1CC=C(C1=O)C2CCC3(C2CCC4C3(CCC5=C4C6CCC(C5(C)C)O6)C)C)C
SMILES (Isomeric) CC(=C1CC=C(C1=O)[C@H]2CC[C@@]3([C@@H]2CC[C@H]4[C@]3(CCC5=C4[C@H]6CC[C@@H](C5(C)C)O6)C)C)C
InChI InChI=1S/C30H42O2/c1-17(2)18-7-8-20(27(18)31)19-13-15-29(5)21(19)9-10-23-26-22(14-16-30(23,29)6)28(3,4)25-12-11-24(26)32-25/h8,19,21,23-25H,7,9-16H2,1-6H3/t19-,21-,23-,24-,25+,29-,30-/m1/s1
InChI Key PYGRZYXAMLFMOS-IBMFSSKUSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H42O2
Molecular Weight 434.70 g/mol
Exact Mass 434.318480578 g/mol
Topological Polar Surface Area (TPSA) 26.30 Ų
XlogP 7.10
Atomic LogP (AlogP) 7.35
H-Bond Acceptor 2
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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CHEMBL1951707
BDBM50423982

2D Structure

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2D Structure of Gypensapogenin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 + 0.5978 59.78%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.6804 68.04%
OATP2B1 inhibitior - 0.8642 86.42%
OATP1B1 inhibitior + 0.7610 76.10%
OATP1B3 inhibitior + 0.9761 97.61%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9481 94.81%
P-glycoprotein inhibitior + 0.7416 74.16%
P-glycoprotein substrate - 0.7345 73.45%
CYP3A4 substrate + 0.6728 67.28%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8462 84.62%
CYP3A4 inhibition - 0.6973 69.73%
CYP2C9 inhibition - 0.8740 87.40%
CYP2C19 inhibition - 0.5297 52.97%
CYP2D6 inhibition - 0.9347 93.47%
CYP1A2 inhibition - 0.6990 69.90%
CYP2C8 inhibition + 0.5497 54.97%
CYP inhibitory promiscuity - 0.7204 72.04%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5474 54.74%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9402 94.02%
Skin irritation - 0.5905 59.05%
Skin corrosion - 0.9404 94.04%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7865 78.65%
Micronuclear - 0.9400 94.00%
Hepatotoxicity + 0.5655 56.55%
skin sensitisation - 0.5796 57.96%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.5893 58.93%
Acute Oral Toxicity (c) III 0.6408 64.08%
Estrogen receptor binding + 0.9066 90.66%
Androgen receptor binding + 0.7630 76.30%
Thyroid receptor binding + 0.5789 57.89%
Glucocorticoid receptor binding + 0.8476 84.76%
Aromatase binding + 0.7540 75.40%
PPAR gamma + 0.7489 74.89%
Honey bee toxicity - 0.7993 79.93%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9849 98.49%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 19700 nM
IC50
PMID: 23177789

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.33% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.42% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.22% 94.45%
CHEMBL2581 P07339 Cathepsin D 90.27% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.27% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.82% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.72% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.82% 89.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.67% 93.04%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.14% 95.89%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 82.88% 83.57%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.00% 90.71%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.94% 94.00%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.63% 93.40%
CHEMBL4225 P49760 Dual specificity protein kinase CLK2 80.50% 80.96%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Coleostephus myconis
Dahlia pinnata
Gynostemma pentaphyllum
Synotis alata

Cross-Links

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PubChem 57403926
NPASS NPC229976
ChEMBL CHEMBL1951707
LOTUS LTS0187108
wikiData Q105216576