Graphiumin B

Details

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Internal ID f91579da-eba5-48f4-8733-361e965a6a31
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name [(1R,4S,5S,12R,15S,16S)-16-[(3S)-3-hydroxyoctanoyl]oxy-2,13-dioxo-8,19-dioxa-23,24,25,26-tetrathia-3,14-diazahexacyclo[10.10.4.01,14.03,12.04,10.015,21]hexacosa-6,9,17,20-tetraen-5-yl] (3S)-3-hydroxyoctanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C34H44N2O10S4/c1-3-5-7-9-23(37)15-27(39)45-25-11-13-43-19-21-17-33-32(42)36-30-22(18-34(36,48-50-49-47-33)31(41)35(33)29(21)25)20-44-14-12-26(30)46-28(40)16-24(38)10-8-6-4-2/h11-14,19-20,23-26,29-30,37-38H,3-10,15-18H2,1-2H3/t23-,24-,25-,26-,29-,30-,33+,34+/m0/s1
InChI Key PKQAJSOEDAWFIE-SJQRTZAESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C34H44N2O10S4
Molecular Weight 769.00 g/mol
Exact Mass 768.18788030 g/mol
Topological Polar Surface Area (TPSA) 253.00 Ų
XlogP 3.40
Atomic LogP (AlogP) 5.63
H-Bond Acceptor 14
H-Bond Donor 2
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Graphiumin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8634 86.34%
Caco-2 - 0.8504 85.04%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.5438 54.38%
OATP2B1 inhibitior - 0.8573 85.73%
OATP1B1 inhibitior + 0.8473 84.73%
OATP1B3 inhibitior + 0.9360 93.60%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9072 90.72%
BSEP inhibitior + 0.9655 96.55%
P-glycoprotein inhibitior + 0.7727 77.27%
P-glycoprotein substrate + 0.5916 59.16%
CYP3A4 substrate + 0.6795 67.95%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8432 84.32%
CYP3A4 inhibition - 0.7559 75.59%
CYP2C9 inhibition - 0.7324 73.24%
CYP2C19 inhibition - 0.6705 67.05%
CYP2D6 inhibition - 0.8709 87.09%
CYP1A2 inhibition - 0.7308 73.08%
CYP2C8 inhibition - 0.7006 70.06%
CYP inhibitory promiscuity - 0.7589 75.89%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.5460 54.60%
Eye corrosion - 0.9800 98.00%
Eye irritation - 0.9106 91.06%
Skin irritation - 0.7490 74.90%
Skin corrosion - 0.9096 90.96%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4102 41.02%
Micronuclear + 0.8400 84.00%
Hepatotoxicity + 0.5678 56.78%
skin sensitisation - 0.8255 82.55%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity + 0.6830 68.30%
Acute Oral Toxicity (c) III 0.5631 56.31%
Estrogen receptor binding + 0.8647 86.47%
Androgen receptor binding + 0.7664 76.64%
Thyroid receptor binding + 0.5305 53.05%
Glucocorticoid receptor binding + 0.6453 64.53%
Aromatase binding + 0.5515 55.15%
PPAR gamma + 0.6945 69.45%
Honey bee toxicity - 0.8491 84.91%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5719 57.19%
Fish aquatic toxicity + 0.9808 98.08%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.05% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.35% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.53% 97.25%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 90.96% 97.29%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.83% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.52% 99.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.80% 91.11%
CHEMBL340 P08684 Cytochrome P450 3A4 88.50% 91.19%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.73% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.56% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.65% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.04% 86.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.24% 100.00%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 81.85% 91.81%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.70% 97.50%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 81.67% 85.94%
CHEMBL230 P35354 Cyclooxygenase-2 81.20% 89.63%
CHEMBL5255 O00206 Toll-like receptor 4 81.13% 92.50%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 80.78% 98.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.67% 93.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.60% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139585861
LOTUS LTS0111340
wikiData Q77493460