Graphisidin

Details

Top
Internal ID e1c2b466-6e7b-414d-90b0-23c444a9d4ed
Taxonomy Phenylpropanoids and polyketides > Diarylheptanoids > Linear diarylheptanoids
IUPAC Name methyl 2-[3-acetyl-5-(2,3-dihydroxy-4-methoxy-6-methoxycarbonylbenzoyl)-4-hydroxybenzoyl]-3,4-dihydroxy-5-methoxybenzoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H24O14/c1-10(29)12-6-11(20(30)18-13(27(37)41-4)8-16(39-2)23(33)25(18)35)7-15(21(12)31)22(32)19-14(28(38)42-5)9-17(40-3)24(34)26(19)36/h6-9,31,33-36H,1-5H3
InChI Key LKSMKKXGGYJABY-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C28H24O14
Molecular Weight 584.50 g/mol
Exact Mass 584.11660544 g/mol
Topological Polar Surface Area (TPSA) 223.00 Ų
XlogP 3.30
Atomic LogP (AlogP) 2.47
H-Bond Acceptor 14
H-Bond Donor 5
Rotatable Bonds 9

Synonyms

Top
methyl 2-[3-acetyl-5-(2,3-dihydroxy-4-methoxy-6-methoxycarbonylbenzoyl)-4-hydroxybenzoyl]-3,4-dihydroxy-5-methoxybenzoate
methyl 2-(3-acetyl-5-(2,3-dihydroxy-4-methoxy-6-methoxycarbonylbenzoyl)-4-hydroxybenzoyl)-3,4-dihydroxy-5-methoxybenzoate
RefChem:144333
CHEBI:199675

2D Structure

Top
2D Structure of Graphisidin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9332 93.32%
Caco-2 - 0.7847 78.47%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.8617 86.17%
OATP2B1 inhibitior - 0.7144 71.44%
OATP1B1 inhibitior + 0.8327 83.27%
OATP1B3 inhibitior - 0.3519 35.19%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9246 92.46%
P-glycoprotein inhibitior + 0.7485 74.85%
P-glycoprotein substrate - 0.5797 57.97%
CYP3A4 substrate - 0.5161 51.61%
CYP2C9 substrate - 0.7812 78.12%
CYP2D6 substrate - 0.8626 86.26%
CYP3A4 inhibition - 0.9307 93.07%
CYP2C9 inhibition - 0.9426 94.26%
CYP2C19 inhibition - 0.9519 95.19%
CYP2D6 inhibition - 0.9233 92.33%
CYP1A2 inhibition - 0.6451 64.51%
CYP2C8 inhibition + 0.6833 68.33%
CYP inhibitory promiscuity - 0.9086 90.86%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.7428 74.28%
Carcinogenicity (trinary) Non-required 0.6518 65.18%
Eye corrosion - 0.9836 98.36%
Eye irritation - 0.7610 76.10%
Skin irritation - 0.8057 80.57%
Skin corrosion - 0.9444 94.44%
Ames mutagenesis - 0.6637 66.37%
Human Ether-a-go-go-Related Gene inhibition + 0.7925 79.25%
Micronuclear + 0.7500 75.00%
Hepatotoxicity + 0.6605 66.05%
skin sensitisation - 0.9349 93.49%
Respiratory toxicity - 0.7333 73.33%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity - 0.6750 67.50%
Nephrotoxicity + 0.4557 45.57%
Acute Oral Toxicity (c) II 0.4368 43.68%
Estrogen receptor binding + 0.8132 81.32%
Androgen receptor binding - 0.4859 48.59%
Thyroid receptor binding + 0.5798 57.98%
Glucocorticoid receptor binding + 0.7362 73.62%
Aromatase binding + 0.6124 61.24%
PPAR gamma + 0.6147 61.47%
Honey bee toxicity - 0.9136 91.36%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.9886 98.86%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.59% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.22% 96.09%
CHEMBL2535 P11166 Glucose transporter 90.18% 98.75%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 88.48% 94.42%
CHEMBL1255126 O15151 Protein Mdm4 88.30% 90.20%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.77% 86.33%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 87.70% 95.50%
CHEMBL2002 P12268 Inosine-5'-monophosphate dehydrogenase 2 86.46% 98.21%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.12% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 84.73% 91.19%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.40% 94.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 83.16% 97.21%
CHEMBL4208 P20618 Proteasome component C5 82.98% 90.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.61% 91.07%
CHEMBL3401 O75469 Pregnane X receptor 82.11% 94.73%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 81.64% 81.11%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 102106656
LOTUS LTS0046987
wikiData Q75067413