Gomphostenin

Details

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Internal ID dadc06a9-2281-44f1-895a-525c07708a73
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Diterpene lactones
IUPAC Name 4-[2-[(1S,2R,4aS,8aS)-2-(hydroxymethyl)-1,4a,5-trimethyl-7-oxo-3,4,8,8a-tetrahydro-2H-naphthalen-1-yl]ethyl]-2H-furan-5-one
SMILES (Canonical) CC1=CC(=O)CC2C1(CCC(C2(C)CCC3=CCOC3=O)CO)C
SMILES (Isomeric) CC1=CC(=O)C[C@@H]2[C@@]1(CC[C@H]([C@@]2(C)CCC3=CCOC3=O)CO)C
InChI InChI=1S/C20H28O4/c1-13-10-16(22)11-17-19(13,2)8-5-15(12-21)20(17,3)7-4-14-6-9-24-18(14)23/h6,10,15,17,21H,4-5,7-9,11-12H2,1-3H3/t15-,17+,19+,20+/m0/s1
InChI Key TUKIEDUNYYIEJB-JQERWDHBSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C20H28O4
Molecular Weight 332.40 g/mol
Exact Mass 332.19875937 g/mol
Topological Polar Surface Area (TPSA) 63.60 Ų
XlogP 2.80
Atomic LogP (AlogP) 3.20
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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CHEMBL597125

2D Structure

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2D Structure of Gomphostenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9802 98.02%
Caco-2 + 0.6954 69.54%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.8313 83.13%
OATP2B1 inhibitior - 0.8664 86.64%
OATP1B1 inhibitior + 0.8529 85.29%
OATP1B3 inhibitior + 0.9354 93.54%
MATE1 inhibitior - 0.8812 88.12%
OCT2 inhibitior + 0.6626 66.26%
BSEP inhibitior + 0.7778 77.78%
P-glycoprotein inhibitior - 0.7254 72.54%
P-glycoprotein substrate - 0.7660 76.60%
CYP3A4 substrate + 0.6222 62.22%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9084 90.84%
CYP3A4 inhibition - 0.5355 53.55%
CYP2C9 inhibition - 0.8892 88.92%
CYP2C19 inhibition - 0.8832 88.32%
CYP2D6 inhibition - 0.9364 93.64%
CYP1A2 inhibition - 0.8555 85.55%
CYP2C8 inhibition - 0.6797 67.97%
CYP inhibitory promiscuity - 0.8685 86.85%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5793 57.93%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9464 94.64%
Skin irritation + 0.4930 49.30%
Skin corrosion - 0.9403 94.03%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7730 77.30%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.5625 56.25%
skin sensitisation - 0.8965 89.65%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity + 0.7650 76.50%
Acute Oral Toxicity (c) III 0.6829 68.29%
Estrogen receptor binding + 0.6012 60.12%
Androgen receptor binding + 0.7050 70.50%
Thyroid receptor binding - 0.4920 49.20%
Glucocorticoid receptor binding + 0.6102 61.02%
Aromatase binding + 0.5649 56.49%
PPAR gamma + 0.5238 52.38%
Honey bee toxicity - 0.8849 88.49%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9893 98.93%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.25% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.11% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 94.04% 83.82%
CHEMBL2581 P07339 Cathepsin D 93.61% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.33% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.71% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.86% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.76% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.48% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.20% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 84.05% 95.93%
CHEMBL3045 P05771 Protein kinase C beta 82.93% 97.63%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.19% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.23% 95.89%
CHEMBL1937 Q92769 Histone deacetylase 2 81.20% 94.75%
CHEMBL218 P21554 Cannabinoid CB1 receptor 80.05% 96.61%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gomphostemma niveum

Cross-Links

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PubChem 46216681
LOTUS LTS0140160
wikiData Q105264823