Gobienine B

Details

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Internal ID 6c16fcb3-9cca-467a-8e7f-72878e4e52c8
Taxonomy Phenylpropanoids and polyketides > Macrolides and analogues
IUPAC Name (1R,3S,5S,6R,7R,8R,11R,12R,15S,29S,31R,33R,34S,35S)-6,7,34,35-tetrahydroxy-33-(hydroxymethyl)-5,12,29-trimethyl-2,4,9,14,30,32-hexaoxatetracyclo[29.4.0.03,8.011,15]pentatriacontane-10,13-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C33H56O13/c1-18-15-13-11-9-7-5-4-6-8-10-12-14-16-21-23(19(2)30(39)43-21)31(40)45-28-26(37)24(35)20(3)42-33(28)46-29-27(38)25(36)22(17-34)44-32(29)41-18/h18-29,32-38H,4-17H2,1-3H3/t18-,19+,20-,21-,22+,23+,24-,25+,26+,27-,28+,29+,32+,33-/m0/s1
InChI Key SFUQOJLEXBXXJQ-LNXSZWLCSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C33H56O13
Molecular Weight 660.80 g/mol
Exact Mass 660.37209184 g/mol
Topological Polar Surface Area (TPSA) 191.00 Ų
XlogP 4.10
Atomic LogP (AlogP) 1.86
H-Bond Acceptor 13
H-Bond Donor 5
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Gobienine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6702 67.02%
Caco-2 - 0.8422 84.22%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.8130 81.30%
OATP2B1 inhibitior - 0.7160 71.60%
OATP1B1 inhibitior + 0.8286 82.86%
OATP1B3 inhibitior + 0.9202 92.02%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.5653 56.53%
P-glycoprotein inhibitior - 0.4434 44.34%
P-glycoprotein substrate - 0.6273 62.73%
CYP3A4 substrate + 0.5531 55.31%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8712 87.12%
CYP3A4 inhibition - 0.8278 82.78%
CYP2C9 inhibition - 0.9033 90.33%
CYP2C19 inhibition - 0.9043 90.43%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.8820 88.20%
CYP2C8 inhibition - 0.8378 83.78%
CYP inhibitory promiscuity - 0.9792 97.92%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7064 70.64%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9063 90.63%
Skin irritation - 0.7007 70.07%
Skin corrosion - 0.9467 94.67%
Ames mutagenesis - 0.5945 59.45%
Human Ether-a-go-go-Related Gene inhibition - 0.4695 46.95%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.5269 52.69%
skin sensitisation - 0.9401 94.01%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.6994 69.94%
Acute Oral Toxicity (c) III 0.4753 47.53%
Estrogen receptor binding + 0.7029 70.29%
Androgen receptor binding + 0.5535 55.35%
Thyroid receptor binding - 0.6655 66.55%
Glucocorticoid receptor binding - 0.4647 46.47%
Aromatase binding + 0.5464 54.64%
PPAR gamma - 0.5202 52.02%
Honey bee toxicity - 0.8785 87.85%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9087 90.87%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 94.58% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.70% 91.11%
CHEMBL2581 P07339 Cathepsin D 92.12% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.25% 96.09%
CHEMBL4072 P07858 Cathepsin B 89.43% 93.67%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.27% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.82% 94.45%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.56% 93.04%
CHEMBL5255 O00206 Toll-like receptor 4 83.51% 92.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.05% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.81% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.29% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.76% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 101204278
LOTUS LTS0177938
wikiData Q77278960