Glycocitrine-I

Details

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Internal ID 931bee78-436c-4ea1-bff6-770ac8b6eea3
Taxonomy Organoheterocyclic compounds > Quinolines and derivatives > Benzoquinolines > Acridines > Acridones
IUPAC Name 1,3,5-trihydroxy-10-methyl-4-(3-methylbut-2-enyl)acridin-9-one
SMILES (Canonical) CC(=CCC1=C2C(=C(C=C1O)O)C(=O)C3=C(N2C)C(=CC=C3)O)C
SMILES (Isomeric) CC(=CCC1=C2C(=C(C=C1O)O)C(=O)C3=C(N2C)C(=CC=C3)O)C
InChI InChI=1S/C19H19NO4/c1-10(2)7-8-11-14(22)9-15(23)16-18(11)20(3)17-12(19(16)24)5-4-6-13(17)21/h4-7,9,21-23H,8H2,1-3H3
InChI Key OPPJKACRWCPJGU-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C19H19NO4
Molecular Weight 325.40 g/mol
Exact Mass 325.13140809 g/mol
Topological Polar Surface Area (TPSA) 81.00 Ų
XlogP 4.50
Atomic LogP (AlogP) 3.32
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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CHEMBL1668598
Oriciacridone E
BDBM50336479

2D Structure

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2D Structure of Glycocitrine-I

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9418 94.18%
Caco-2 + 0.9097 90.97%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Nucleus 0.6360 63.60%
OATP2B1 inhibitior - 0.5639 56.39%
OATP1B1 inhibitior + 0.9081 90.81%
OATP1B3 inhibitior + 0.9275 92.75%
MATE1 inhibitior - 0.6800 68.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5095 50.95%
P-glycoprotein inhibitior - 0.7823 78.23%
P-glycoprotein substrate - 0.6458 64.58%
CYP3A4 substrate + 0.5524 55.24%
CYP2C9 substrate + 0.6000 60.00%
CYP2D6 substrate - 0.8525 85.25%
CYP3A4 inhibition - 0.8320 83.20%
CYP2C9 inhibition - 0.6732 67.32%
CYP2C19 inhibition - 0.5226 52.26%
CYP2D6 inhibition - 0.6316 63.16%
CYP1A2 inhibition + 0.6901 69.01%
CYP2C8 inhibition - 0.8697 86.97%
CYP inhibitory promiscuity + 0.7094 70.94%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5408 54.08%
Eye corrosion - 0.9902 99.02%
Eye irritation + 0.6118 61.18%
Skin irritation - 0.8136 81.36%
Skin corrosion - 0.9401 94.01%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4017 40.17%
Micronuclear + 0.6000 60.00%
Hepatotoxicity - 0.5110 51.10%
skin sensitisation - 0.8474 84.74%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.8712 87.12%
Acute Oral Toxicity (c) III 0.6724 67.24%
Estrogen receptor binding + 0.7670 76.70%
Androgen receptor binding + 0.5349 53.49%
Thyroid receptor binding + 0.6128 61.28%
Glucocorticoid receptor binding + 0.8664 86.64%
Aromatase binding + 0.5266 52.66%
PPAR gamma + 0.8922 89.22%
Honey bee toxicity - 0.9241 92.41%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9045 90.45%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL3272 O60911 Cathepsin L2 25000 nM
IC50
PMID: 21277783

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.97% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 98.50% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.50% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.87% 91.11%
CHEMBL3192 Q9BY41 Histone deacetylase 8 95.82% 93.99%
CHEMBL3401 O75469 Pregnane X receptor 93.01% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.32% 89.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.53% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.71% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.78% 96.09%
CHEMBL1937 Q92769 Histone deacetylase 2 86.03% 94.75%
CHEMBL2535 P11166 Glucose transporter 82.31% 98.75%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.07% 94.45%
CHEMBL1929 P47989 Xanthine dehydrogenase 80.13% 96.12%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clematis flammula
Gentianella magellanica
Hortia brasiliana
Swinglea glutinosa
Vepris glaberrima

Cross-Links

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PubChem 11580650
NPASS NPC170333
ChEMBL CHEMBL1668598
LOTUS LTS0042590
wikiData Q105196492