(2S,3R,4S,5S,6R)-2-[4-[(2R,3S)-3,7-dihydroxy-5-methoxy-3,4-dihydro-2H-chromen-2-yl]-2,6-dimethoxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID 37e1cd52-8c89-48f0-94c0-794bf2c1ac2d
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[4-[(2R,3S)-3,7-dihydroxy-5-methoxy-3,4-dihydro-2H-chromen-2-yl]-2,6-dimethoxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) COC1=CC(=CC(=C1OC2C(C(C(C(O2)CO)O)O)O)OC)C3C(CC4=C(O3)C=C(C=C4OC)O)O
SMILES (Isomeric) COC1=CC(=CC(=C1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)OC)[C@@H]3[C@H](CC4=C(O3)C=C(C=C4OC)O)O
InChI InChI=1S/C24H30O12/c1-31-14-6-11(26)7-15-12(14)8-13(27)22(34-15)10-4-16(32-2)23(17(5-10)33-3)36-24-21(30)20(29)19(28)18(9-25)35-24/h4-7,13,18-22,24-30H,8-9H2,1-3H3/t13-,18+,19+,20-,21+,22+,24-/m0/s1
InChI Key JWNKHFRORAHUKE-FMNMHOSXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C24H30O12
Molecular Weight 510.50 g/mol
Exact Mass 510.17372639 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -0.37
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5S,6R)-2-[4-[(2R,3S)-3,7-dihydroxy-5-methoxy-3,4-dihydro-2H-chromen-2-yl]-2,6-dimethoxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5552 55.52%
Caco-2 - 0.8248 82.48%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.4718 47.18%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8799 87.99%
OATP1B3 inhibitior + 0.9427 94.27%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6997 69.97%
P-glycoprotein inhibitior - 0.5745 57.45%
P-glycoprotein substrate - 0.7544 75.44%
CYP3A4 substrate + 0.6078 60.78%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7447 74.47%
CYP3A4 inhibition - 0.9468 94.68%
CYP2C9 inhibition - 0.9325 93.25%
CYP2C19 inhibition - 0.9434 94.34%
CYP2D6 inhibition - 0.9328 93.28%
CYP1A2 inhibition - 0.8877 88.77%
CYP2C8 inhibition + 0.5779 57.79%
CYP inhibitory promiscuity - 0.8321 83.21%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6606 66.06%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9256 92.56%
Skin irritation - 0.8339 83.39%
Skin corrosion - 0.9583 95.83%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7394 73.94%
Micronuclear + 0.5700 57.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9210 92.10%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.4539 45.39%
Acute Oral Toxicity (c) III 0.6687 66.87%
Estrogen receptor binding + 0.7125 71.25%
Androgen receptor binding - 0.5249 52.49%
Thyroid receptor binding + 0.6126 61.26%
Glucocorticoid receptor binding + 0.6477 64.77%
Aromatase binding - 0.5272 52.72%
PPAR gamma + 0.6239 62.39%
Honey bee toxicity - 0.8224 82.24%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.3812 38.12%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.97% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.88% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.22% 85.14%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.44% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.10% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.00% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.73% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.85% 95.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.75% 95.89%
CHEMBL2535 P11166 Glucose transporter 86.58% 98.75%
CHEMBL3401 O75469 Pregnane X receptor 86.14% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.63% 94.00%
CHEMBL2581 P07339 Cathepsin D 84.50% 98.95%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 82.90% 82.38%
CHEMBL4208 P20618 Proteasome component C5 82.64% 90.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.72% 96.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.36% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glochidion zeylanicum

Cross-Links

Top
PubChem 11762951
NPASS NPC6292
LOTUS LTS0132180
wikiData Q105136238