Gleditsioside N

Details

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Internal ID 49c79c45-fd23-4728-b5b1-0d28573553b9
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5R,6R)-3-[(2S,3R,4S,5R,6S)-5-[(2S,3R,4S,5R)-3,5-dihydroxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-5-hydroxy-6-[[(2E,6S)-6-hydroxy-2,6-dimethylocta-2,7-dienoyl]oxymethyl]-4-[(2E,6S)-6-hydroxy-2-(hydroxymethyl)-6-methylocta-2,7-dienoyl]oxyoxan-2-yl] (4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-[(2R,3R,4S,5R,6R)-6-[[(2S,3R,4R,5R)-4,5-dihydroxy-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC(=O)C34CCC(CC3C5=CCC6C7(CCC(C(C7CCC6(C5(CC4)C)C)(C)C)OC8C(C(C(C(O8)COC9C(C(C(CO9)O)O)OC1C(C(C(CO1)O)O)O)O)O)O)C)(C)C)COC(=O)C(=CCCC(C)(C=C)O)C)O)OC(=O)C(=CCCC(C)(C=C)O)CO)O)O)OC1C(C(C(CO1)O)OC1C(C(C(CO1)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2OC(=O)[C@@]34CC[C@@]5(C(=CC[C@H]6[C@]5(CC[C@@H]7[C@@]6(CC[C@@H](C7(C)C)O[C@H]8[C@@H]([C@H]([C@H]([C@H](O8)CO[C@H]9[C@@H]([C@@H]([C@@H](CO9)O)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O)O)O)O)C)C)[C@@H]3CC(CC4)(C)C)C)COC(=O)/C(=C/CC[C@@](C)(C=C)O)/C)O)OC(=O)/C(=C/CC[C@@](C)(C=C)O)/CO)O)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O)O
InChI InChI=1S/C88H138O38/c1-14-83(9,109)24-16-18-40(3)71(106)111-38-50-58(98)68(121-72(107)42(33-89)19-17-25-84(10,110)15-2)70(125-76-64(104)60(100)66(41(4)117-76)122-75-65(105)67(48(93)37-114-75)123-73-61(101)54(94)45(90)34-112-73)79(119-50)126-80(108)88-30-28-81(5,6)32-44(88)43-20-21-52-85(11)26-23-53(82(7,8)51(85)22-27-87(52,13)86(43,12)29-31-88)120-77-63(103)59(99)57(97)49(118-77)39-116-78-69(56(96)47(92)36-115-78)124-74-62(102)55(95)46(91)35-113-74/h14-15,18-20,41,44-70,73-79,89-105,109-110H,1-2,16-17,21-39H2,3-13H3/b40-18+,42-19+/t41-,44-,45+,46+,47+,48+,49+,50+,51-,52+,53-,54-,55-,56+,57-,58+,59-,60-,61+,62+,63+,64+,65+,66-,67-,68-,69+,70+,73-,74-,75-,76-,77-,78-,79-,83+,84+,85-,86+,87+,88-/m0/s1
InChI Key JZWICBROGGTPEB-SWWXCASCSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C88H138O38
Molecular Weight 1804.00 g/mol
Exact Mass 1802.8866099 g/mol
Topological Polar Surface Area (TPSA) 583.00 Ų
XlogP -1.10
Atomic LogP (AlogP) -1.58
H-Bond Acceptor 38
H-Bond Donor 19
Rotatable Bonds 29

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Gleditsioside N

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7412 74.12%
Caco-2 - 0.8568 85.68%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8514 85.14%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7645 76.45%
OATP1B3 inhibitior - 0.4149 41.49%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5276 52.76%
BSEP inhibitior + 0.9684 96.84%
P-glycoprotein inhibitior + 0.7422 74.22%
P-glycoprotein substrate + 0.7348 73.48%
CYP3A4 substrate + 0.7603 76.03%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8807 88.07%
CYP3A4 inhibition - 0.7385 73.85%
CYP2C9 inhibition - 0.8388 83.88%
CYP2C19 inhibition - 0.8911 89.11%
CYP2D6 inhibition - 0.9464 94.64%
CYP1A2 inhibition - 0.8860 88.60%
CYP2C8 inhibition + 0.8393 83.93%
CYP inhibitory promiscuity - 0.9736 97.36%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6233 62.33%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.8956 89.56%
Skin irritation - 0.5687 56.87%
Skin corrosion - 0.9385 93.85%
Ames mutagenesis - 0.6270 62.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7392 73.92%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.6875 68.75%
skin sensitisation - 0.8870 88.70%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.9492 94.92%
Acute Oral Toxicity (c) III 0.8004 80.04%
Estrogen receptor binding - 0.5411 54.11%
Androgen receptor binding + 0.7635 76.35%
Thyroid receptor binding + 0.8015 80.15%
Glucocorticoid receptor binding + 0.8438 84.38%
Aromatase binding + 0.7765 77.65%
PPAR gamma + 0.8042 80.42%
Honey bee toxicity - 0.6022 60.22%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9787 97.87%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.34% 91.11%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 97.46% 95.17%
CHEMBL3714130 P46095 G-protein coupled receptor 6 96.30% 97.36%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.24% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.41% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.70% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.66% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.02% 96.09%
CHEMBL2179 P04062 Beta-glucocerebrosidase 91.50% 85.31%
CHEMBL2581 P07339 Cathepsin D 90.15% 98.95%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 89.60% 96.90%
CHEMBL5028 O14672 ADAM10 89.47% 97.50%
CHEMBL3401 O75469 Pregnane X receptor 88.43% 94.73%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.32% 100.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 87.59% 97.21%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.95% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.63% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.61% 95.89%
CHEMBL1871 P10275 Androgen Receptor 86.55% 96.43%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.14% 92.94%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.66% 91.07%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 85.49% 93.00%
CHEMBL5255 O00206 Toll-like receptor 4 85.41% 92.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.55% 99.17%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.94% 95.50%
CHEMBL4302 P08183 P-glycoprotein 1 81.94% 92.98%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 81.11% 96.47%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 81.04% 85.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.80% 96.77%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.71% 99.23%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.65% 100.00%
CHEMBL4581 P52732 Kinesin-like protein 1 80.27% 93.18%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gleditsia sinensis

Cross-Links

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PubChem 163064877
LOTUS LTS0189612
wikiData Q105137664