Gleditsioside C

Details

Top
Internal ID 53e7ea43-6b38-48d4-8d41-ade4c4ebb358
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5S,6R)-3-[(2S,3R,4R,5R,6S)-5-[(2S,3R,4S,5R)-3,5-dihydroxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-4-hydroxy-6-methyl-3-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4,5-dihydroxy-6-[[(2E,6S)-6-hydroxy-2-(hydroxymethyl)-6-methylocta-2,7-dienoyl]oxymethyl]oxan-2-yl] (4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-[(2R,3R,4S,5S,6R)-6-[[(2R,3S,4R,5S)-4,5-dihydroxy-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-5-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC(=O)C34CCC(CC3C5=CCC6C7(CCC(C(C7CCC6(C5(CC4O)C)C)(C)C)OC8C(C(C(C(O8)COC9C(C(C(CO9)O)O)OC1C(C(C(CO1)O)O)O)O)O)O)C)(C)C)COC(=O)C(=CCCC(C)(C=C)O)CO)O)O)OC1C(C(C(C(O1)CO)O)O)O)O)OC1C(C(C(CO1)O)OC1C(C(C(CO1)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2OC(=O)[C@]34CCC(C[C@H]3C5=CC[C@@H]6[C@]7(CC[C@@H](C([C@@H]7CC[C@]6([C@@]5(C[C@H]4O)C)C)(C)C)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO[C@@H]9[C@H]([C@@H]([C@H](CO9)O)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O)O)O)O)C)(C)C)COC(=O)/C(=C/CC[C@@](C)(C=C)O)/CO)O)O)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O)O
InChI InChI=1S/C84H134O42/c1-11-80(7,109)18-12-13-34(25-85)68(107)110-31-42-53(97)56(100)66(125-75-67(124-73-60(104)54(98)51(95)41(26-86)117-73)61(105)63(33(2)116-75)121-71-62(106)64(40(90)30-113-71)122-69-57(101)48(92)37(87)27-111-69)76(119-42)126-77(108)84-22-21-78(3,4)23-36(84)35-14-15-45-81(8)19-17-47(79(5,6)44(81)16-20-82(45,9)83(35,10)24-46(84)91)120-72-59(103)55(99)52(96)43(118-72)32-115-74-65(50(94)39(89)29-114-74)123-70-58(102)49(93)38(88)28-112-70/h11,13-14,33,36-67,69-76,85-106,109H,1,12,15-32H2,2-10H3/b34-13+/t33-,36-,37+,38+,39-,40+,41+,42+,43+,44-,45+,46+,47-,48-,49-,50+,51-,52+,53+,54-,55-,56-,57+,58+,59+,60+,61+,62+,63-,64-,65-,66+,67+,69-,70-,71-,72-,73-,74+,75-,76-,80+,81-,82+,83+,84+/m0/s1
InChI Key AFLKYKNVPJFJBF-JNYAIHCBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C84H134O42
Molecular Weight 1815.90 g/mol
Exact Mass 1814.8349683 g/mol
Topological Polar Surface Area (TPSA) 656.00 Ų
XlogP -5.50
Atomic LogP (AlogP) -7.00
H-Bond Acceptor 42
H-Bond Donor 23
Rotatable Bonds 26

Synonyms

Top
(-)-Gleditsioside C

2D Structure

Top
2D Structure of Gleditsioside C

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7412 74.12%
Caco-2 - 0.8579 85.79%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8514 85.14%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior - 0.3492 34.92%
OATP1B3 inhibitior - 0.4149 41.49%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5276 52.76%
BSEP inhibitior + 0.9651 96.51%
P-glycoprotein inhibitior + 0.7425 74.25%
P-glycoprotein substrate + 0.7203 72.03%
CYP3A4 substrate + 0.7602 76.02%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8807 88.07%
CYP3A4 inhibition - 0.7385 73.85%
CYP2C9 inhibition - 0.8388 83.88%
CYP2C19 inhibition - 0.8911 89.11%
CYP2D6 inhibition - 0.9464 94.64%
CYP1A2 inhibition - 0.8860 88.60%
CYP2C8 inhibition + 0.8386 83.86%
CYP inhibitory promiscuity - 0.9736 97.36%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6233 62.33%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.8958 89.58%
Skin irritation - 0.5687 56.87%
Skin corrosion - 0.9385 93.85%
Ames mutagenesis - 0.6870 68.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7495 74.95%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.7125 71.25%
skin sensitisation - 0.8870 88.70%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.9375 93.75%
Acute Oral Toxicity (c) III 0.8004 80.04%
Estrogen receptor binding + 0.5754 57.54%
Androgen receptor binding + 0.7594 75.94%
Thyroid receptor binding + 0.7625 76.25%
Glucocorticoid receptor binding + 0.8175 81.75%
Aromatase binding + 0.7477 74.77%
PPAR gamma + 0.8223 82.23%
Honey bee toxicity - 0.6060 60.60%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9787 97.87%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.74% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.25% 97.25%
CHEMBL3714130 P46095 G-protein coupled receptor 6 96.38% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.45% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 95.41% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.48% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.01% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.94% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 91.08% 94.73%
CHEMBL5028 O14672 ADAM10 89.73% 97.50%
CHEMBL1871 P10275 Androgen Receptor 89.11% 96.43%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.72% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.68% 100.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.37% 96.61%
CHEMBL325 Q13547 Histone deacetylase 1 87.14% 95.92%
CHEMBL2179 P04062 Beta-glucocerebrosidase 86.52% 85.31%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 86.52% 91.07%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 85.30% 96.90%
CHEMBL5255 O00206 Toll-like receptor 4 84.60% 92.50%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.53% 95.50%
CHEMBL233 P35372 Mu opioid receptor 83.07% 97.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.95% 99.17%
CHEMBL2581 P07339 Cathepsin D 82.52% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 82.50% 95.93%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.10% 95.89%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.09% 96.77%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.79% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.49% 92.94%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 81.28% 96.47%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.04% 86.92%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gleditsia sinensis

Cross-Links

Top
PubChem 162826485
LOTUS LTS0204751
wikiData Q104911309