Ginsenoside Rh3

Details

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Internal ID 2167755c-c5d6-4a64-873c-d58eb5d07915
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-12-hydroxy-4,4,8,10,14-pentamethyl-17-[(2Z)-6-methylhepta-2,5-dien-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCC=C(C)C1CCC2(C1C(CC3C2(CCC4C3(CCC(C4(C)C)OC5C(C(C(C(O5)CO)O)O)O)C)C)O)C)C
SMILES (Isomeric) CC(=CC/C=C(/C)\[C@H]1CC[C@@]2([C@@H]1[C@@H](C[C@H]3[C@]2(CC[C@@H]4[C@@]3(CC[C@@H](C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)C)O)C)C
InChI InChI=1S/C36H60O7/c1-20(2)10-9-11-21(3)22-12-16-36(8)28(22)23(38)18-26-34(6)15-14-27(33(4,5)25(34)13-17-35(26,36)7)43-32-31(41)30(40)29(39)24(19-37)42-32/h10-11,22-32,37-41H,9,12-19H2,1-8H3/b21-11-/t22-,23-,24-,25+,26-,27+,28+,29-,30+,31-,32+,34+,35-,36-/m1/s1
InChI Key PHLXREOMFNVWOH-YAGNRYSRSA-N
Popularity 15 references in papers

Physical and Chemical Properties

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Molecular Formula C36H60O7
Molecular Weight 604.90 g/mol
Exact Mass 604.43390425 g/mol
Topological Polar Surface Area (TPSA) 120.00 Ų
XlogP 7.00
Atomic LogP (AlogP) 5.13
H-Bond Acceptor 7
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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105558-26-7
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-12-hydroxy-4,4,8,10,14-pentamethyl-17-[(2Z)-6-methylhepta-2,5-dien-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol
166040-90-0
C36H60O7
SCHEMBL20904246
CHEBI:172004
DTXSID401317008
HY-N0606
MFCD10566602
AKOS037514676
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Ginsenoside Rh3

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8156 81.56%
Caco-2 - 0.8309 83.09%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7286 72.86%
OATP2B1 inhibitior - 0.7174 71.74%
OATP1B1 inhibitior + 0.8214 82.14%
OATP1B3 inhibitior + 0.8549 85.49%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6542 65.42%
BSEP inhibitior + 0.5814 58.14%
P-glycoprotein inhibitior + 0.8238 82.38%
P-glycoprotein substrate - 0.8800 88.00%
CYP3A4 substrate + 0.7116 71.16%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.8866 88.66%
CYP2C9 inhibition - 0.7986 79.86%
CYP2C19 inhibition - 0.8784 87.84%
CYP2D6 inhibition - 0.9331 93.31%
CYP1A2 inhibition - 0.8288 82.88%
CYP2C8 inhibition + 0.5495 54.95%
CYP inhibitory promiscuity - 0.8889 88.89%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7170 71.70%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9246 92.46%
Skin irritation - 0.5508 55.08%
Skin corrosion - 0.9488 94.88%
Ames mutagenesis - 0.7524 75.24%
Human Ether-a-go-go-Related Gene inhibition + 0.8792 87.92%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.8352 83.52%
skin sensitisation - 0.8969 89.69%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.7702 77.02%
Acute Oral Toxicity (c) I 0.4826 48.26%
Estrogen receptor binding + 0.6750 67.50%
Androgen receptor binding + 0.7379 73.79%
Thyroid receptor binding - 0.5324 53.24%
Glucocorticoid receptor binding + 0.6289 62.89%
Aromatase binding + 0.7000 70.00%
PPAR gamma + 0.6288 62.88%
Honey bee toxicity - 0.6340 63.40%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9437 94.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.06% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.23% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.71% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.39% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.37% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.06% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.94% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.11% 92.94%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.21% 95.50%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.64% 95.83%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.15% 92.62%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.29% 96.61%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.83% 100.00%
CHEMBL2996 Q05655 Protein kinase C delta 80.65% 97.79%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 80.29% 95.58%
CHEMBL226 P30542 Adenosine A1 receptor 80.05% 95.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Panax ginseng

Cross-Links

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PubChem 20839223
NPASS NPC86302