Gilvocarcin M

Details

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Internal ID d7ef4719-4d1f-490f-bdad-89984161dd26
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name 4-[(2R,3R,4R,5S)-3,4-dihydroxy-5-[(1R)-1-hydroxyethyl]oxolan-2-yl]-1-hydroxy-10,12-dimethoxy-8-methylnaphtho[1,2-c]isochromen-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H26O9/c1-10-7-14-18(16(8-10)32-3)13-9-17(33-4)20-15(28)6-5-12(19(20)24(13)35-26(14)31)25-22(30)21(29)23(34-25)11(2)27/h5-9,11,21-23,25,27-30H,1-4H3/t11-,21-,22-,23+,25-/m1/s1
InChI Key BYFOTBZTKXSZHH-FUCVEXJHSA-N
Popularity 20 references in papers

Physical and Chemical Properties

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Molecular Formula C26H26O9
Molecular Weight 482.50 g/mol
Exact Mass 482.15768240 g/mol
Topological Polar Surface Area (TPSA) 135.00 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.67
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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77879-89-1
6H-Benzo(d)naphtho(1,2-b)pyran-6-one, 4-(6-deoxy-alpha-galactofuranosyl)-1-hydroxy-10,12-dimethoxy-8-methyl-
CHEMBL5206779
AKOS040756253
4-[(2R,3R,4R,5S)-3,4-Dihydroxy-5-[(1R)-1-hydroxyethyl]oxolan-2-yl]-1-hydroxy-10,12-dimethoxy-8-methylnaphtho[1,2-c]isochromen-6-one

2D Structure

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2D Structure of Gilvocarcin M

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8409 84.09%
Caco-2 - 0.7411 74.11%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.6895 68.95%
OATP2B1 inhibitior - 0.7055 70.55%
OATP1B1 inhibitior + 0.9212 92.12%
OATP1B3 inhibitior - 0.2192 21.92%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.7528 75.28%
P-glycoprotein inhibitior + 0.6639 66.39%
P-glycoprotein substrate - 0.6332 63.32%
CYP3A4 substrate + 0.6368 63.68%
CYP2C9 substrate - 0.8186 81.86%
CYP2D6 substrate - 0.8244 82.44%
CYP3A4 inhibition + 0.6787 67.87%
CYP2C9 inhibition - 0.8955 89.55%
CYP2C19 inhibition - 0.7065 70.65%
CYP2D6 inhibition - 0.7185 71.85%
CYP1A2 inhibition - 0.8025 80.25%
CYP2C8 inhibition + 0.5545 55.45%
CYP inhibitory promiscuity + 0.6083 60.83%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Danger 0.4431 44.31%
Eye corrosion - 0.9865 98.65%
Eye irritation - 0.9087 90.87%
Skin irritation - 0.7585 75.85%
Skin corrosion - 0.9609 96.09%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5967 59.67%
Micronuclear + 0.8400 84.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation - 0.9068 90.68%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.7267 72.67%
Acute Oral Toxicity (c) III 0.4514 45.14%
Estrogen receptor binding + 0.7842 78.42%
Androgen receptor binding + 0.7118 71.18%
Thyroid receptor binding + 0.5762 57.62%
Glucocorticoid receptor binding + 0.6944 69.44%
Aromatase binding + 0.5619 56.19%
PPAR gamma + 0.7051 70.51%
Honey bee toxicity - 0.7810 78.10%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9208 92.08%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.48% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.12% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.08% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.08% 89.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.23% 85.14%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.62% 99.15%
CHEMBL2535 P11166 Glucose transporter 94.55% 98.75%
CHEMBL4040 P28482 MAP kinase ERK2 92.84% 83.82%
CHEMBL3401 O75469 Pregnane X receptor 90.99% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.36% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.25% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.43% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.54% 95.89%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 86.07% 97.21%
CHEMBL1907 P15144 Aminopeptidase N 85.78% 93.31%
CHEMBL2146302 O94925 Glutaminase kidney isoform, mitochondrial 83.98% 100.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 83.39% 100.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.36% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10917833
LOTUS LTS0089441
wikiData Q104949200