Gibbosicolid D

Details

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Internal ID b873642e-d2af-4356-bebc-49f3a8fd21fc
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (1R,3R,5R,10S,14R,15R,17R,18S)-17-hydroxy-6,6,10,14,18-pentamethyl-15-[1-[(2R,4S)-4-methyl-5-oxooxolan-2-yl]prop-1-en-2-yl]-2-oxapentacyclo[9.7.0.01,3.05,10.014,18]octadec-11-ene-7,13-dione
SMILES (Canonical) CC1CC(OC1=O)C=C(C)C2CC(C3(C2(C(=O)C=C4C35C(O5)CC6C4(CCC(=O)C6(C)C)C)C)C)O
SMILES (Isomeric) C[C@H]1C[C@@H](OC1=O)C=C(C)[C@H]2C[C@H]([C@@]3([C@@]2(C(=O)C=C4[C@]35[C@H](O5)C[C@@H]6[C@@]4(CCC(=O)C6(C)C)C)C)C)O
InChI InChI=1S/C30H40O6/c1-15(10-17-11-16(2)25(34)35-17)18-12-23(33)29(7)28(18,6)22(32)13-20-27(5)9-8-21(31)26(3,4)19(27)14-24-30(20,29)36-24/h10,13,16-19,23-24,33H,8-9,11-12,14H2,1-7H3/t16-,17-,18+,19-,23+,24+,27-,28-,29+,30-/m0/s1
InChI Key DBCOZDMIVDWFEY-UDIMBENTSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H40O6
Molecular Weight 496.60 g/mol
Exact Mass 496.28248899 g/mol
Topological Polar Surface Area (TPSA) 93.20 Ų
XlogP 3.20
Atomic LogP (AlogP) 4.34
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Gibbosicolid D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9915 99.15%
Caco-2 - 0.6206 62.06%
Blood Brain Barrier + 0.8250 82.50%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Mitochondria 0.7579 75.79%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8647 86.47%
OATP1B3 inhibitior + 0.9629 96.29%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior + 0.5250 52.50%
BSEP inhibitior + 0.7641 76.41%
P-glycoprotein inhibitior + 0.6786 67.86%
P-glycoprotein substrate + 0.5455 54.55%
CYP3A4 substrate + 0.6989 69.89%
CYP2C9 substrate - 0.8253 82.53%
CYP2D6 substrate - 0.8786 87.86%
CYP3A4 inhibition - 0.6689 66.89%
CYP2C9 inhibition - 0.8020 80.20%
CYP2C19 inhibition - 0.9236 92.36%
CYP2D6 inhibition - 0.9524 95.24%
CYP1A2 inhibition - 0.7267 72.67%
CYP2C8 inhibition + 0.6196 61.96%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.4364 43.64%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9398 93.98%
Skin irritation + 0.5265 52.65%
Skin corrosion - 0.8810 88.10%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4205 42.05%
Micronuclear - 0.6200 62.00%
Hepatotoxicity - 0.5041 50.41%
skin sensitisation - 0.7481 74.81%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity + 0.5443 54.43%
Acute Oral Toxicity (c) I 0.3454 34.54%
Estrogen receptor binding + 0.6816 68.16%
Androgen receptor binding + 0.7576 75.76%
Thyroid receptor binding + 0.6562 65.62%
Glucocorticoid receptor binding + 0.8042 80.42%
Aromatase binding + 0.7390 73.90%
PPAR gamma + 0.5292 52.92%
Honey bee toxicity - 0.7029 70.29%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9931 99.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.64% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.79% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.65% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.15% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.85% 99.23%
CHEMBL2581 P07339 Cathepsin D 88.07% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.12% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.78% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.44% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.95% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.49% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 83.41% 94.75%
CHEMBL1951 P21397 Monoamine oxidase A 82.36% 91.49%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.23% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Salvia pubescens

Cross-Links

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PubChem 145721196
LOTUS LTS0141640
wikiData Q105275868