gibberellin A12(2-)

Details

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Internal ID 5ff0d3e4-42fc-48a0-920a-dd972a515297
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > C20-gibberellins > C20-gibberellin 6-carboxylic acids
IUPAC Name (1R,2S,3S,4R,8S,9S,12R)-4,8-dimethyl-13-methylidenetetracyclo[10.2.1.01,9.03,8]pentadecane-2,4-dicarboxylate
SMILES (Canonical) CC12CCCC(C1C(C34C2CCC(C3)C(=C)C4)C(=O)[O-])(C)C(=O)[O-]
SMILES (Isomeric) C[C@@]12CCC[C@@]([C@H]1[C@@H]([C@]34[C@H]2CC[C@H](C3)C(=C)C4)C(=O)[O-])(C)C(=O)[O-]
InChI InChI=1S/C20H28O4/c1-11-9-20-10-12(11)5-6-13(20)18(2)7-4-8-19(3,17(23)24)15(18)14(20)16(21)22/h12-15H,1,4-10H2,2-3H3,(H,21,22)(H,23,24)/p-2/t12-,13+,14-,15+,18+,19-,20+/m1/s1
InChI Key UJFQJDAESQJXTG-UFUZVNNQSA-L
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C20H26O4-2
Molecular Weight 330.40 g/mol
Exact Mass 330.18310931 g/mol
Topological Polar Surface Area (TPSA) 80.30 Ų
XlogP 5.20
Atomic LogP (AlogP) 1.29
H-Bond Acceptor 4
H-Bond Donor 0
Rotatable Bonds 2

Synonyms

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GA12
C20 skeleton
C20-GA skeleton
C20-gibberellin skeleton
C20-GAs
CHEBI:58627
open lactone gibberrellin skeleton
Q27125924
1beta,4a-dimethyl-8-methylidene-4aalpha,4bbeta-gibbane-1alpha,10beta-dicarboxylate
(1R,2S,3S,4R,8S,9S,12R)-4,8-dimethyl-13-methylidenetetracyclo[10.2.1.0(1,9).0(3,8)]pentadecane-2,4-dicarboxylate
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of gibberellin A12(2-)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9634 96.34%
Caco-2 + 0.6498 64.98%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Mitochondria 0.5797 57.97%
OATP2B1 inhibitior - 0.8569 85.69%
OATP1B1 inhibitior + 0.8704 87.04%
OATP1B3 inhibitior + 0.8952 89.52%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.9136 91.36%
P-glycoprotein inhibitior - 0.8654 86.54%
P-glycoprotein substrate - 0.7832 78.32%
CYP3A4 substrate + 0.6195 61.95%
CYP2C9 substrate - 0.5936 59.36%
CYP2D6 substrate - 0.8667 86.67%
CYP3A4 inhibition - 0.8349 83.49%
CYP2C9 inhibition - 0.8018 80.18%
CYP2C19 inhibition - 0.8197 81.97%
CYP2D6 inhibition - 0.9135 91.35%
CYP1A2 inhibition - 0.7305 73.05%
CYP2C8 inhibition - 0.6834 68.34%
CYP inhibitory promiscuity - 0.8954 89.54%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.6219 62.19%
Eye corrosion - 0.9666 96.66%
Eye irritation - 0.7610 76.10%
Skin irritation - 0.6092 60.92%
Skin corrosion - 0.9632 96.32%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6430 64.30%
Micronuclear - 0.6700 67.00%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation - 0.5681 56.81%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity - 0.5701 57.01%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.5941 59.41%
Acute Oral Toxicity (c) III 0.7628 76.28%
Estrogen receptor binding + 0.7519 75.19%
Androgen receptor binding + 0.5931 59.31%
Thyroid receptor binding + 0.5733 57.33%
Glucocorticoid receptor binding + 0.6908 69.08%
Aromatase binding + 0.5875 58.75%
PPAR gamma - 0.5910 59.10%
Honey bee toxicity - 0.8741 87.41%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.51% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.11% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.08% 96.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.67% 95.50%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 86.87% 96.38%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 86.64% 91.11%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 85.04% 82.69%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.30% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.10% 97.09%
CHEMBL340 P08684 Cytochrome P450 3A4 81.91% 91.19%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.45% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.67% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.23% 95.89%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.07% 96.77%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.00% 96.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea japonica
Dioscorea oppositifolia
Dioscorea polystachya

Cross-Links

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PubChem 25244528
NPASS NPC94588