Germacra-1(10),4,11(13)-trien-12-ol

Details

Top
Internal ID e375fedb-e3cc-4043-85e7-c372dc8a60c6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids > Germacrane sesquiterpenoids
IUPAC Name 2-[(1R,3E,7E)-4,8-dimethylcyclodeca-3,7-dien-1-yl]prop-2-en-1-ol
SMILES (Canonical) CC1=CCCC(=CCC(CC1)C(=C)CO)C
SMILES (Isomeric) C/C/1=C\CC/C(=C/C[C@@H](CC1)C(=C)CO)/C
InChI InChI=1S/C15H24O/c1-12-5-4-6-13(2)8-10-15(9-7-12)14(3)11-16/h5,8,15-16H,3-4,6-7,9-11H2,1-2H3/b12-5+,13-8+/t15-/m1/s1
InChI Key NDZJCEAHBZKIDU-KGSGWQTPSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C15H24O
Molecular Weight 220.35 g/mol
Exact Mass 220.182715385 g/mol
Topological Polar Surface Area (TPSA) 20.20 Ų
XlogP 3.40
Atomic LogP (AlogP) 4.01
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

Top
2-[(1R,3E,7E)-4,8-dimethylcyclodeca-3,7-dien-1-yl]prop-2-en-1-ol
SCHEMBL336313
CHEBI:62090
NDZJCEAHBZKIDU-MZONOFEJSA-N
DTXSID001171149
C19676
Q27131593
(1R,3E,7E)-4,8-Dimethyl-beta-methylene-3,7-cyclodecadiene-1-ethanol
347377-91-7

2D Structure

Top
2D Structure of Germacra-1(10),4,11(13)-trien-12-ol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9868 98.68%
Caco-2 + 0.9204 92.04%
Blood Brain Barrier + 0.8750 87.50%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Lysosomes 0.7481 74.81%
OATP2B1 inhibitior - 0.8491 84.91%
OATP1B1 inhibitior + 0.9564 95.64%
OATP1B3 inhibitior + 0.9484 94.84%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior - 0.7187 71.87%
P-glycoprotein inhibitior - 0.9166 91.66%
P-glycoprotein substrate - 0.9239 92.39%
CYP3A4 substrate - 0.5542 55.42%
CYP2C9 substrate - 0.6591 65.91%
CYP2D6 substrate - 0.7543 75.43%
CYP3A4 inhibition - 0.7819 78.19%
CYP2C9 inhibition - 0.8596 85.96%
CYP2C19 inhibition - 0.8322 83.22%
CYP2D6 inhibition - 0.9024 90.24%
CYP1A2 inhibition - 0.7485 74.85%
CYP2C8 inhibition - 0.7044 70.44%
CYP inhibitory promiscuity - 0.7665 76.65%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.7828 78.28%
Carcinogenicity (trinary) Non-required 0.6543 65.43%
Eye corrosion - 0.5875 58.75%
Eye irritation + 0.6110 61.10%
Skin irritation - 0.5336 53.36%
Skin corrosion - 0.9587 95.87%
Ames mutagenesis - 0.9300 93.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3690 36.90%
Micronuclear - 0.9700 97.00%
Hepatotoxicity - 0.5270 52.70%
skin sensitisation + 0.8819 88.19%
Respiratory toxicity - 0.7778 77.78%
Reproductive toxicity - 0.7889 78.89%
Mitochondrial toxicity - 0.8125 81.25%
Nephrotoxicity + 0.4874 48.74%
Acute Oral Toxicity (c) III 0.8306 83.06%
Estrogen receptor binding - 0.8400 84.00%
Androgen receptor binding - 0.7264 72.64%
Thyroid receptor binding - 0.7803 78.03%
Glucocorticoid receptor binding - 0.6771 67.71%
Aromatase binding - 0.7155 71.55%
PPAR gamma - 0.6792 67.92%
Honey bee toxicity - 0.9645 96.45%
Biodegradation - 0.5500 55.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9809 98.09%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.04% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.00% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.38% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.10% 97.09%
CHEMBL2581 P07339 Cathepsin D 84.90% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.82% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.72% 95.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.17% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Aucklandia costus

Cross-Links

Top
PubChem 25245123
NPASS NPC43656