Geranyl 6-O-alpha-L-rhamnopyranosyl-beta-D-glucopyranoside

Details

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Internal ID e807742c-76e1-43c7-8f9c-de4e17116cec
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3R,4R,5R,6S)-2-[[(2R,3S,4S,5R,6R)-6-[(2E)-3,7-dimethylocta-2,6-dienoxy]-3,4,5-trihydroxyoxan-2-yl]methoxy]-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OCC2C(C(C(C(O2)OCC=C(C)CCC=C(C)C)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)OC/C=C(\C)/CCC=C(C)C)O)O)O)O)O)O
InChI InChI=1S/C22H38O10/c1-11(2)6-5-7-12(3)8-9-29-21-20(28)18(26)16(24)14(32-21)10-30-22-19(27)17(25)15(23)13(4)31-22/h6,8,13-28H,5,7,9-10H2,1-4H3/b12-8+/t13-,14+,15-,16+,17+,18-,19+,20+,21+,22+/m0/s1
InChI Key YZJBMONDZNACEV-GXBCDXNVSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C22H38O10
Molecular Weight 462.50 g/mol
Exact Mass 462.24649740 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -0.65
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 9

Synonyms

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DTXSID801123918
Geranyl 6-O-alpha-L-rhamnopyranosyl-beta-D-glucopyranoside
3,7-Dimethyl-2,6-octadienyl 6-O-(alpha-L-rhamnopyranosyl)-beta-D-glucopyranoside
(2E)-3,7-Dimethyl-2,6-octadien-1-yl 6-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranoside
84534-31-6

2D Structure

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2D Structure of Geranyl 6-O-alpha-L-rhamnopyranosyl-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6290 62.90%
Caco-2 - 0.8169 81.69%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.8627 86.27%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9030 90.30%
OATP1B3 inhibitior + 0.8483 84.83%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.7210 72.10%
P-glycoprotein inhibitior - 0.7600 76.00%
P-glycoprotein substrate - 0.8910 89.10%
CYP3A4 substrate + 0.5465 54.65%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8282 82.82%
CYP3A4 inhibition - 0.9156 91.56%
CYP2C9 inhibition - 0.8527 85.27%
CYP2C19 inhibition - 0.8056 80.56%
CYP2D6 inhibition - 0.9046 90.46%
CYP1A2 inhibition - 0.8567 85.67%
CYP2C8 inhibition - 0.7931 79.31%
CYP inhibitory promiscuity - 0.9003 90.03%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6861 68.61%
Eye corrosion - 0.9879 98.79%
Eye irritation - 0.9667 96.67%
Skin irritation - 0.7656 76.56%
Skin corrosion - 0.9610 96.10%
Ames mutagenesis - 0.5654 56.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6987 69.87%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.7591 75.91%
skin sensitisation - 0.8632 86.32%
Respiratory toxicity - 0.8111 81.11%
Reproductive toxicity + 0.5333 53.33%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.7353 73.53%
Acute Oral Toxicity (c) III 0.6651 66.51%
Estrogen receptor binding - 0.5078 50.78%
Androgen receptor binding - 0.7588 75.88%
Thyroid receptor binding - 0.4902 49.02%
Glucocorticoid receptor binding - 0.6389 63.89%
Aromatase binding + 0.6552 65.52%
PPAR gamma + 0.6054 60.54%
Honey bee toxicity - 0.7993 79.93%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9599 95.99%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.50% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 92.93% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.80% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.34% 97.36%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 85.33% 92.08%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.06% 97.25%
CHEMBL2581 P07339 Cathepsin D 84.01% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.84% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.84% 86.33%
CHEMBL5957 P21589 5'-nucleotidase 80.71% 97.78%

Cross-Links

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PubChem 15612565
NPASS NPC90643
LOTUS LTS0003852
wikiData Q105369277