Geranin C

Details

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Internal ID 242b9c84-43e0-42ff-81f2-a1ca9d74c536
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Biflavonoids and polyflavonoids
IUPAC Name (1R,5R,6S,13S,21R)-13-(4-hydroxyphenyl)-5-(3,4,5-trihydroxyphenyl)-4,12,14-trioxapentacyclo[11.7.1.02,11.03,8.015,20]henicosa-2(11),3(8),9,15,17,19-hexaene-6,9,17,19,21-pentol
SMILES (Canonical) C1C(C(OC2=C1C(=CC3=C2C4C(C(O3)(OC5=CC(=CC(=C45)O)O)C6=CC=C(C=C6)O)O)O)C7=CC(=C(C(=C7)O)O)O)O
SMILES (Isomeric) C1[C@@H]([C@H](OC2=C1C(=CC3=C2[C@@H]4[C@H]([C@](O3)(OC5=CC(=CC(=C45)O)O)C6=CC=C(C=C6)O)O)O)C7=CC(=C(C(=C7)O)O)O)O
InChI InChI=1S/C30H24O12/c31-13-3-1-12(2-4-13)30-29(39)25(23-17(34)7-14(32)8-21(23)41-30)24-22(42-30)10-16(33)15-9-20(37)27(40-28(15)24)11-5-18(35)26(38)19(36)6-11/h1-8,10,20,25,27,29,31-39H,9H2/t20-,25+,27+,29+,30-/m0/s1
InChI Key DWIOQBZYELAYFO-AMEQXESTSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H24O12
Molecular Weight 576.50 g/mol
Exact Mass 576.12677620 g/mol
Topological Polar Surface Area (TPSA) 210.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.79
H-Bond Acceptor 12
H-Bond Donor 9
Rotatable Bonds 2

Synonyms

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CHEMBL2262630

2D Structure

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2D Structure of Geranin C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7002 70.02%
Caco-2 - 0.8924 89.24%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.5149 51.49%
OATP2B1 inhibitior - 0.5648 56.48%
OATP1B1 inhibitior + 0.8252 82.52%
OATP1B3 inhibitior + 0.8374 83.74%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8945 89.45%
P-glycoprotein inhibitior + 0.7225 72.25%
P-glycoprotein substrate - 0.6238 62.38%
CYP3A4 substrate + 0.6279 62.79%
CYP2C9 substrate - 0.7965 79.65%
CYP2D6 substrate + 0.3672 36.72%
CYP3A4 inhibition - 0.9095 90.95%
CYP2C9 inhibition - 0.8939 89.39%
CYP2C19 inhibition - 0.8571 85.71%
CYP2D6 inhibition - 0.9488 94.88%
CYP1A2 inhibition - 0.9758 97.58%
CYP2C8 inhibition + 0.8217 82.17%
CYP inhibitory promiscuity - 0.9554 95.54%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6019 60.19%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.8198 81.98%
Skin irritation - 0.6303 63.03%
Skin corrosion - 0.9314 93.14%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8781 87.81%
Micronuclear + 0.7759 77.59%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8144 81.44%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.6413 64.13%
Acute Oral Toxicity (c) IV 0.5178 51.78%
Estrogen receptor binding + 0.7708 77.08%
Androgen receptor binding + 0.8071 80.71%
Thyroid receptor binding + 0.6451 64.51%
Glucocorticoid receptor binding + 0.6644 66.44%
Aromatase binding + 0.5745 57.45%
PPAR gamma + 0.7436 74.36%
Honey bee toxicity - 0.7555 75.55%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.7000 70.00%
Fish aquatic toxicity + 0.7943 79.43%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.74% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.09% 96.09%
CHEMBL233 P35372 Mu opioid receptor 91.29% 97.93%
CHEMBL236 P41143 Delta opioid receptor 90.15% 99.35%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.14% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.78% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.12% 97.09%
CHEMBL2581 P07339 Cathepsin D 88.57% 98.95%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 86.13% 94.62%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 85.94% 85.11%
CHEMBL3194 P02766 Transthyretin 85.29% 90.71%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 85.27% 93.40%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.83% 95.89%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.13% 99.15%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.70% 92.94%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.46% 95.56%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 81.81% 90.93%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.80% 85.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.33% 86.33%
CHEMBL4208 P20618 Proteasome component C5 80.20% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Geranium niveum

Cross-Links

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PubChem 76330308
LOTUS LTS0248606
wikiData Q104990562