Gephyronic acid (hemiketal-beta)

Details

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Internal ID 5044157c-c904-489d-9a95-b5f618bb216a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Diterpene glycosides
IUPAC Name 2-[(2S,3R,4S,6R)-6-hydroxy-6-[(2S,4S,5S)-5-hydroxy-4-methyl-5-[(2R,3R)-2-methyl-3-[(2S)-4-methylpent-3-en-2-yl]oxiran-2-yl]pentan-2-yl]-4-methoxy-3,5,5-trimethyloxan-2-yl]acetic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H46O7/c1-14(2)11-16(4)22-25(9,33-22)21(29)15(3)12-17(5)26(30)24(7,8)23(31-10)18(6)19(32-26)13-20(27)28/h11,15-19,21-23,29-30H,12-13H2,1-10H3,(H,27,28)/t15-,16-,17-,18+,19-,21-,22+,23-,25+,26+/m0/s1
InChI Key ABLGLEMPOXGHOL-ZRAAXUGRSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C26H46O7
Molecular Weight 470.60 g/mol
Exact Mass 470.32435380 g/mol
Topological Polar Surface Area (TPSA) 109.00 Ų
XlogP 4.20
Atomic LogP (AlogP) 4.01
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Gephyronic acid (hemiketal-beta)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9084 90.84%
Caco-2 - 0.7436 74.36%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6385 63.85%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8681 86.81%
OATP1B3 inhibitior + 0.9136 91.36%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.7526 75.26%
P-glycoprotein inhibitior - 0.4660 46.60%
P-glycoprotein substrate - 0.5397 53.97%
CYP3A4 substrate + 0.6433 64.33%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8748 87.48%
CYP3A4 inhibition - 0.8941 89.41%
CYP2C9 inhibition - 0.7967 79.67%
CYP2C19 inhibition - 0.7504 75.04%
CYP2D6 inhibition - 0.9158 91.58%
CYP1A2 inhibition - 0.8973 89.73%
CYP2C8 inhibition + 0.4580 45.80%
CYP inhibitory promiscuity - 0.9103 91.03%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9243 92.43%
Carcinogenicity (trinary) Non-required 0.5789 57.89%
Eye corrosion - 0.9840 98.40%
Eye irritation - 0.9322 93.22%
Skin irritation - 0.6580 65.80%
Skin corrosion - 0.9346 93.46%
Ames mutagenesis - 0.5354 53.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6417 64.17%
Micronuclear - 0.6441 64.41%
Hepatotoxicity - 0.5409 54.09%
skin sensitisation - 0.6950 69.50%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.6333 63.33%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.6080 60.80%
Acute Oral Toxicity (c) III 0.5363 53.63%
Estrogen receptor binding + 0.7710 77.10%
Androgen receptor binding + 0.6907 69.07%
Thyroid receptor binding + 0.6469 64.69%
Glucocorticoid receptor binding + 0.5832 58.32%
Aromatase binding + 0.6862 68.62%
PPAR gamma + 0.7117 71.17%
Honey bee toxicity - 0.6576 65.76%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.7642 76.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 99.18% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.41% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.92% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.44% 98.95%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 93.90% 96.47%
CHEMBL340 P08684 Cytochrome P450 3A4 92.73% 91.19%
CHEMBL2413 P32246 C-C chemokine receptor type 1 89.76% 89.50%
CHEMBL221 P23219 Cyclooxygenase-1 89.03% 90.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.21% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.46% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.57% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.08% 97.14%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.39% 99.17%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.85% 91.07%
CHEMBL3776 Q14790 Caspase-8 81.81% 97.06%
CHEMBL3922 P50579 Methionine aminopeptidase 2 81.24% 97.28%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 52952025
LOTUS LTS0010943
wikiData Q104908668