Geoditin A

Details

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Internal ID fd47566b-c8f8-435e-869c-e15981bf9d3b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (3Z,3aS,5aR,9aR,9bS)-3a,6,6,9a-tetramethyl-3-[(3E,5E,8E)-6-methyl-7,10-dioxoundeca-3,5,8-trien-2-ylidene]-4,5,5a,8,9,9b-hexahydro-1H-cyclopenta[a]naphthalene-2,7-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H38O4/c1-18(21(31)12-11-20(3)30)9-8-10-19(2)26-22(32)17-24-28(6)16-14-25(33)27(4,5)23(28)13-15-29(24,26)7/h8-12,23-24H,13-17H2,1-7H3/b10-8+,12-11+,18-9+,26-19+/t23-,24-,28-,29-/m0/s1
InChI Key LZZDDKOYYZTLIC-OGMVXUOOSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C29H38O4
Molecular Weight 450.60 g/mol
Exact Mass 450.27700969 g/mol
Topological Polar Surface Area (TPSA) 68.30 Ų
XlogP 5.30
Atomic LogP (AlogP) 5.92
H-Bond Acceptor 4
H-Bond Donor 0
Rotatable Bonds 5

Synonyms

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CHEMBL484634
AKOS040734971

2D Structure

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2D Structure of Geoditin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9959 99.59%
Caco-2 - 0.6257 62.57%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.7695 76.95%
OATP2B1 inhibitior - 0.8585 85.85%
OATP1B1 inhibitior + 0.8479 84.79%
OATP1B3 inhibitior + 0.9438 94.38%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.9842 98.42%
P-glycoprotein inhibitior + 0.8532 85.32%
P-glycoprotein substrate - 0.7279 72.79%
CYP3A4 substrate + 0.6609 66.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8843 88.43%
CYP3A4 inhibition - 0.8017 80.17%
CYP2C9 inhibition - 0.8601 86.01%
CYP2C19 inhibition - 0.9110 91.10%
CYP2D6 inhibition - 0.9608 96.08%
CYP1A2 inhibition - 0.9366 93.66%
CYP2C8 inhibition - 0.5724 57.24%
CYP inhibitory promiscuity - 0.8576 85.76%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5866 58.66%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9326 93.26%
Skin irritation + 0.5968 59.68%
Skin corrosion - 0.9600 96.00%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9009 90.09%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.5978 59.78%
skin sensitisation + 0.6453 64.53%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity + 0.5261 52.61%
Acute Oral Toxicity (c) III 0.6712 67.12%
Estrogen receptor binding + 0.7386 73.86%
Androgen receptor binding + 0.5489 54.89%
Thyroid receptor binding + 0.7061 70.61%
Glucocorticoid receptor binding + 0.7411 74.11%
Aromatase binding + 0.7003 70.03%
PPAR gamma + 0.7105 71.05%
Honey bee toxicity - 0.8072 80.72%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9962 99.62%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.82% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.07% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.21% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.77% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.31% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 86.09% 91.24%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.92% 82.69%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.79% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.40% 97.09%
CHEMBL2581 P07339 Cathepsin D 83.43% 98.95%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 82.43% 85.11%
CHEMBL340 P08684 Cytochrome P450 3A4 81.75% 91.19%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.63% 97.25%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 80.71% 85.30%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.60% 93.04%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 44575708
LOTUS LTS0258816
wikiData Q105160231