Gentrogenin

Details

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Internal ID 079fddc2-a3d4-4e2a-989d-1547fb1636a2
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (1R,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-10-one
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(C(=O)CC5C4CC=C6C5(CCC(C6)O)C)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(C(=O)C[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O)C)C)C)OC1
InChI InChI=1S/C27H40O4/c1-15-7-10-27(30-14-15)16(2)24-22(31-27)12-21-19-6-5-17-11-18(28)8-9-25(17,3)20(19)13-23(29)26(21,24)4/h5,15-16,18-22,24,28H,6-14H2,1-4H3/t15-,16+,18+,19-,20+,21+,22+,24+,25+,26-,27-/m1/s1
InChI Key UVLDESQWQRMYKD-MOAZMYQBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C27H40O4
Molecular Weight 428.60 g/mol
Exact Mass 428.29265975 g/mol
Topological Polar Surface Area (TPSA) 55.80 Ų
XlogP 4.00
Atomic LogP (AlogP) 4.89
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 0

Synonyms

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Oxodiosgenin
UNII-143BUS408H
143BUS408H
427-28-1
Botogenin
Spirost-5-en-12-one, 3-hydroxy-, (3beta,25R)-
GENTROGENIN [MI]
SCHEMBL4292594
3-Hydroxyspirost-5-en-12-one
DTXSID50962629
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Gentrogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9942 99.42%
Caco-2 + 0.5262 52.62%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8495 84.95%
OATP2B1 inhibitior - 0.7176 71.76%
OATP1B1 inhibitior + 0.8432 84.32%
OATP1B3 inhibitior + 0.9653 96.53%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5852 58.52%
BSEP inhibitior + 0.8408 84.08%
P-glycoprotein inhibitior + 0.6446 64.46%
P-glycoprotein substrate + 0.5257 52.57%
CYP3A4 substrate + 0.7111 71.11%
CYP2C9 substrate - 0.6334 63.34%
CYP2D6 substrate - 0.8055 80.55%
CYP3A4 inhibition - 0.7474 74.74%
CYP2C9 inhibition - 0.9278 92.78%
CYP2C19 inhibition - 0.9647 96.47%
CYP2D6 inhibition - 0.9391 93.91%
CYP1A2 inhibition - 0.8892 88.92%
CYP2C8 inhibition + 0.5828 58.28%
CYP inhibitory promiscuity - 0.9655 96.55%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5582 55.82%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9595 95.95%
Skin irritation + 0.5410 54.10%
Skin corrosion - 0.9352 93.52%
Ames mutagenesis - 0.9100 91.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3719 37.19%
Micronuclear - 0.8300 83.00%
Hepatotoxicity + 0.5500 55.00%
skin sensitisation - 0.8506 85.06%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity + 0.6893 68.93%
Acute Oral Toxicity (c) III 0.4412 44.12%
Estrogen receptor binding + 0.8120 81.20%
Androgen receptor binding + 0.7408 74.08%
Thyroid receptor binding + 0.6866 68.66%
Glucocorticoid receptor binding + 0.8315 83.15%
Aromatase binding + 0.7083 70.83%
PPAR gamma + 0.6716 67.16%
Honey bee toxicity - 0.6138 61.38%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity + 0.9765 97.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.52% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.79% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.19% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.18% 97.09%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.72% 82.69%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.12% 93.04%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 86.04% 96.95%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 85.36% 86.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.35% 86.33%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.98% 99.23%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.23% 90.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.84% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.97% 95.56%
CHEMBL5255 O00206 Toll-like receptor 4 82.84% 92.50%
CHEMBL259 P32245 Melanocortin receptor 4 80.53% 95.38%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.10% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Heteropolygonatum alte-lobatum
Solanum amotapense

Cross-Links

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PubChem 20054922
LOTUS LTS0253806
wikiData Q27251576