Gentirigeoside E

Details

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Internal ID 6fcd2d26-c683-4f93-9298-53840f106300
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,4S,5S)-2-[(3S,5R,8R,9R,10R,13R,14R,17S)-3-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-4,5-dihydroxy-6,6-dimethyloxane-2-carboxylic acid
SMILES (Canonical) CC1(C2CCC3(C(C2(CCC1OC4C(C(C(C(O4)CO)O)O)OC5C(C(C(C(O5)CO)O)O)O)C)CCC6C3(CCC6C7(CC(C(C(O7)(C)C)O)O)C(=O)O)C)C)C
SMILES (Isomeric) C[C@@]12CC[C@@H]([C@H]1CC[C@H]3[C@]2(CC[C@@H]4[C@@]3(CC[C@@H](C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C)C)[C@@]7(C[C@@H]([C@@H](C(O7)(C)C)O)O)C(=O)O
InChI InChI=1S/C42H70O16/c1-37(2)24-11-15-41(7)25(9-8-19-20(10-14-40(19,41)6)42(36(52)53)16-21(45)33(51)38(3,4)58-42)39(24,5)13-12-26(37)56-35-32(30(49)28(47)23(18-44)55-35)57-34-31(50)29(48)27(46)22(17-43)54-34/h19-35,43-51H,8-18H2,1-7H3,(H,52,53)/t19-,20+,21+,22-,23-,24+,25-,26+,27-,28-,29+,30+,31-,32-,33+,34+,35+,39+,40-,41-,42+/m1/s1
InChI Key VRJXPIOFTJEYMJ-BQFHCAHQSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C42H70O16
Molecular Weight 831.00 g/mol
Exact Mass 830.46638614 g/mol
Topological Polar Surface Area (TPSA) 266.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 0.42
H-Bond Acceptor 15
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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CHEMBL267683

2D Structure

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2D Structure of Gentirigeoside E

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6739 67.39%
Caco-2 - 0.8870 88.70%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7997 79.97%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8102 81.02%
OATP1B3 inhibitior + 0.8901 89.01%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7287 72.87%
BSEP inhibitior - 0.8274 82.74%
P-glycoprotein inhibitior + 0.7488 74.88%
P-glycoprotein substrate - 0.7298 72.98%
CYP3A4 substrate + 0.7336 73.36%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8809 88.09%
CYP3A4 inhibition - 0.9186 91.86%
CYP2C9 inhibition - 0.8887 88.87%
CYP2C19 inhibition - 0.9086 90.86%
CYP2D6 inhibition - 0.9588 95.88%
CYP1A2 inhibition - 0.9272 92.72%
CYP2C8 inhibition + 0.5661 56.61%
CYP inhibitory promiscuity - 0.9674 96.74%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6885 68.85%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9078 90.78%
Skin irritation - 0.6974 69.74%
Skin corrosion - 0.9528 95.28%
Ames mutagenesis - 0.7270 72.70%
Human Ether-a-go-go-Related Gene inhibition - 0.4282 42.82%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8170 81.70%
skin sensitisation - 0.9346 93.46%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.7959 79.59%
Acute Oral Toxicity (c) I 0.6197 61.97%
Estrogen receptor binding + 0.7368 73.68%
Androgen receptor binding + 0.7611 76.11%
Thyroid receptor binding - 0.5968 59.68%
Glucocorticoid receptor binding + 0.6197 61.97%
Aromatase binding + 0.6611 66.11%
PPAR gamma + 0.7251 72.51%
Honey bee toxicity - 0.6942 69.42%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5505 55.05%
Fish aquatic toxicity + 0.8680 86.80%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.06% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.71% 96.61%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.89% 91.11%
CHEMBL5255 O00206 Toll-like receptor 4 88.72% 92.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.67% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.67% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.51% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.43% 95.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.20% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.79% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.28% 99.17%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.12% 100.00%
CHEMBL5028 O14672 ADAM10 80.93% 97.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.38% 89.00%
CHEMBL221 P23219 Cyclooxygenase-1 80.32% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.31% 86.33%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 80.29% 97.86%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gentiana crassa subsp. rigescens

Cross-Links

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PubChem 44422968
NPASS NPC236753
LOTUS LTS0209360
wikiData Q105291821