Gentirigenic acid

Details

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Internal ID 165c694f-3114-40bf-bec5-5c67aefebe6d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,4S,5S)-4,5-dihydroxy-2-[(3S,4S,5R,8R,9R,10R,13R,14R,17S)-3-hydroxy-4-(hydroxymethyl)-4,8,10,14-tetramethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-6,6-dimethyloxane-2-carboxylic acid
SMILES (Canonical) CC1(C(C(CC(O1)(C2CCC3(C2CCC4C3(CCC5C4(CCC(C5(C)CO)O)C)C)C)C(=O)O)O)O)C
SMILES (Isomeric) C[C@@]12CC[C@@H]([C@H]1CC[C@H]3[C@]2(CC[C@@H]4[C@@]3(CC[C@@H]([C@]4(C)CO)O)C)C)[C@@]5(C[C@@H]([C@@H](C(O5)(C)C)O)O)C(=O)O
InChI InChI=1S/C30H50O7/c1-25(2)23(34)19(32)15-30(37-25,24(35)36)18-9-13-28(5)17(18)7-8-21-26(3)12-11-22(33)27(4,16-31)20(26)10-14-29(21,28)6/h17-23,31-34H,7-16H2,1-6H3,(H,35,36)/t17-,18+,19+,20-,21-,22+,23+,26+,27-,28-,29-,30+/m1/s1
InChI Key UVHCBPZJADNRKK-FQPCDPSRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H50O7
Molecular Weight 522.70 g/mol
Exact Mass 522.35565393 g/mol
Topological Polar Surface Area (TPSA) 127.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 3.75
H-Bond Acceptor 6
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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CHEMBL387932

2D Structure

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2D Structure of Gentirigenic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8153 81.53%
Caco-2 - 0.7411 74.11%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7907 79.07%
OATP2B1 inhibitior - 0.5709 57.09%
OATP1B1 inhibitior + 0.8929 89.29%
OATP1B3 inhibitior + 0.9002 90.02%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7579 75.79%
BSEP inhibitior - 0.5653 56.53%
P-glycoprotein inhibitior - 0.5837 58.37%
P-glycoprotein substrate - 0.6560 65.60%
CYP3A4 substrate + 0.6988 69.88%
CYP2C9 substrate - 0.6280 62.80%
CYP2D6 substrate - 0.8533 85.33%
CYP3A4 inhibition - 0.8390 83.90%
CYP2C9 inhibition - 0.8799 87.99%
CYP2C19 inhibition - 0.9204 92.04%
CYP2D6 inhibition - 0.9634 96.34%
CYP1A2 inhibition - 0.8761 87.61%
CYP2C8 inhibition - 0.6549 65.49%
CYP inhibitory promiscuity - 0.9691 96.91%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7307 73.07%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.9329 93.29%
Skin irritation - 0.6216 62.16%
Skin corrosion - 0.9476 94.76%
Ames mutagenesis - 0.6970 69.70%
Human Ether-a-go-go-Related Gene inhibition - 0.5347 53.47%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9222 92.22%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity + 0.4724 47.24%
Acute Oral Toxicity (c) I 0.4727 47.27%
Estrogen receptor binding + 0.6640 66.40%
Androgen receptor binding + 0.7645 76.45%
Thyroid receptor binding + 0.5368 53.68%
Glucocorticoid receptor binding + 0.6824 68.24%
Aromatase binding + 0.6839 68.39%
PPAR gamma + 0.5511 55.11%
Honey bee toxicity - 0.8803 88.03%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8966 89.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.72% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.05% 96.61%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.74% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.40% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.26% 100.00%
CHEMBL221 P23219 Cyclooxygenase-1 84.64% 90.17%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.45% 95.50%
CHEMBL1966 Q02127 Dihydroorotate dehydrogenase 83.40% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.18% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.99% 95.89%
CHEMBL5028 O14672 ADAM10 81.93% 97.50%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 80.89% 91.11%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 80.37% 96.38%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.37% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.25% 93.04%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gentiana crassa subsp. rigescens

Cross-Links

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PubChem 44423055
NPASS NPC24413
LOTUS LTS0005968
wikiData Q105279846