Geldanamycin F

Details

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Internal ID dfaddc68-006c-4484-8b9e-f7fd8c697163
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acids and conjugates > Long-chain fatty acids
IUPAC Name (2E,4Z,6S,7S,8E,10S,11R,12S,14R)-15-(5-amino-2-methoxy-3,6-dioxocyclohexa-1,4-dien-1-yl)-7-carbamoyloxy-11-hydroxy-6,12-dimethoxy-2,8,10,14-tetramethylpentadeca-2,4,8-trienoic acid
SMILES (Canonical) CC(CC1=C(C(=O)C=C(C1=O)N)OC)CC(C(C(C)C=C(C)C(C(C=CC=C(C)C(=O)O)OC)OC(=O)N)O)OC
SMILES (Isomeric) C[C@H](CC1=C(C(=O)C=C(C1=O)N)OC)C[C@@H]([C@@H]([C@@H](C)/C=C(\C)/[C@@H]([C@H](/C=C\C=C(/C)\C(=O)O)OC)OC(=O)N)O)OC
InChI InChI=1S/C29H42N2O10/c1-15(11-19-25(34)20(30)14-21(32)27(19)40-7)12-23(39-6)24(33)17(3)13-18(4)26(41-29(31)37)22(38-5)10-8-9-16(2)28(35)36/h8-10,13-15,17,22-24,26,33H,11-12,30H2,1-7H3,(H2,31,37)(H,35,36)/b10-8-,16-9+,18-13+/t15-,17+,22+,23+,24-,26+/m1/s1
InChI Key QLZJHIDNTPSPOO-KSRBKZBZSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C29H42N2O10
Molecular Weight 578.70 g/mol
Exact Mass 578.28394554 g/mol
Topological Polar Surface Area (TPSA) 198.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 2.32
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Geldanamycin F

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7963 79.63%
Caco-2 - 0.7890 78.90%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6283 62.83%
OATP2B1 inhibitior - 0.5757 57.57%
OATP1B1 inhibitior + 0.8740 87.40%
OATP1B3 inhibitior + 0.9329 93.29%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9130 91.30%
P-glycoprotein inhibitior + 0.8309 83.09%
P-glycoprotein substrate + 0.6691 66.91%
CYP3A4 substrate + 0.6580 65.80%
CYP2C9 substrate - 0.7960 79.60%
CYP2D6 substrate - 0.8663 86.63%
CYP3A4 inhibition - 0.8275 82.75%
CYP2C9 inhibition - 0.8505 85.05%
CYP2C19 inhibition - 0.7883 78.83%
CYP2D6 inhibition - 0.8812 88.12%
CYP1A2 inhibition - 0.8141 81.41%
CYP2C8 inhibition + 0.4633 46.33%
CYP inhibitory promiscuity - 0.8637 86.37%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9143 91.43%
Carcinogenicity (trinary) Non-required 0.5779 57.79%
Eye corrosion - 0.9867 98.67%
Eye irritation - 0.9402 94.02%
Skin irritation - 0.7999 79.99%
Skin corrosion - 0.9455 94.55%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5733 57.33%
Micronuclear + 0.7500 75.00%
Hepatotoxicity + 0.5761 57.61%
skin sensitisation - 0.8721 87.21%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.5253 52.53%
Acute Oral Toxicity (c) III 0.6346 63.46%
Estrogen receptor binding + 0.7592 75.92%
Androgen receptor binding + 0.7487 74.87%
Thyroid receptor binding + 0.5237 52.37%
Glucocorticoid receptor binding + 0.8142 81.42%
Aromatase binding + 0.6106 61.06%
PPAR gamma + 0.7001 70.01%
Honey bee toxicity - 0.7318 73.18%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9291 92.91%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.27% 98.95%
CHEMBL221 P23219 Cyclooxygenase-1 97.03% 90.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.60% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.32% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.98% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.30% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.57% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.38% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 87.39% 96.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.65% 93.56%
CHEMBL226 P30542 Adenosine A1 receptor 85.84% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.27% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Helminthostachys zeylanica

Cross-Links

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PubChem 139591498
LOTUS LTS0108753
wikiData Q105322497