Geldanamycin E

Details

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Internal ID ba609f66-12fd-4007-80b2-930d5cb8e115
Taxonomy Benzenoids > Phenol ethers > Anisoles
IUPAC Name [(4E,6Z,8S,9S,10E,12S,13R,14S,16R)-9-carbamoyloxy-13,20-dihydroxy-8,14,19-trimethoxy-4,10,12,16-tetramethyl-3-oxo-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18(22),19-hexaen-22-yl] 2-hydroxyacetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C31H44N2O11/c1-16-11-20-28(43-25(36)15-34)21(14-22(35)29(20)42-7)33-30(38)17(2)9-8-10-23(40-5)27(44-31(32)39)19(4)13-18(3)26(37)24(12-16)41-6/h8-10,13-14,16,18,23-24,26-27,34-35,37H,11-12,15H2,1-7H3,(H2,32,39)(H,33,38)/b10-8-,17-9+,19-13+/t16-,18+,23+,24+,26-,27+/m1/s1
InChI Key XGKOWRWJWKRQHX-PAZISRHASA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C31H44N2O11
Molecular Weight 620.70 g/mol
Exact Mass 620.29451022 g/mol
Topological Polar Surface Area (TPSA) 196.00 Ų
XlogP 2.20
Atomic LogP (AlogP) 2.76
H-Bond Acceptor 11
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Geldanamycin E

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8875 88.75%
Caco-2 - 0.8338 83.38%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.5117 51.17%
OATP2B1 inhibitior - 0.7080 70.80%
OATP1B1 inhibitior + 0.8710 87.10%
OATP1B3 inhibitior + 0.9286 92.86%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9704 97.04%
P-glycoprotein inhibitior + 0.8273 82.73%
P-glycoprotein substrate + 0.8784 87.84%
CYP3A4 substrate + 0.6996 69.96%
CYP2C9 substrate - 0.8005 80.05%
CYP2D6 substrate - 0.8629 86.29%
CYP3A4 inhibition - 0.8084 80.84%
CYP2C9 inhibition - 0.8095 80.95%
CYP2C19 inhibition - 0.7376 73.76%
CYP2D6 inhibition - 0.8737 87.37%
CYP1A2 inhibition - 0.7088 70.88%
CYP2C8 inhibition + 0.7006 70.06%
CYP inhibitory promiscuity - 0.9269 92.69%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.6317 63.17%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.9374 93.74%
Skin irritation - 0.8013 80.13%
Skin corrosion - 0.9392 93.92%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4750 47.50%
Micronuclear + 0.8100 81.00%
Hepatotoxicity + 0.6022 60.22%
skin sensitisation - 0.8597 85.97%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity - 0.8498 84.98%
Acute Oral Toxicity (c) III 0.6634 66.34%
Estrogen receptor binding + 0.7955 79.55%
Androgen receptor binding + 0.7643 76.43%
Thyroid receptor binding + 0.5530 55.30%
Glucocorticoid receptor binding + 0.8506 85.06%
Aromatase binding + 0.6223 62.23%
PPAR gamma + 0.7241 72.41%
Honey bee toxicity - 0.6778 67.78%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.8731 87.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.42% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.38% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.10% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.30% 94.45%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 95.77% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.98% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 94.46% 92.94%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 93.35% 91.07%
CHEMBL2535 P11166 Glucose transporter 91.57% 98.75%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.41% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.39% 95.56%
CHEMBL1913 P09619 Platelet-derived growth factor receptor beta 89.03% 95.70%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.76% 86.33%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 88.30% 94.80%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.30% 94.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.75% 96.95%
CHEMBL2581 P07339 Cathepsin D 85.28% 98.95%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.76% 93.03%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 83.56% 91.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.19% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.99% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.15% 89.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.28% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 80.09% 91.19%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139591497
LOTUS LTS0260891
wikiData Q105327641