Gardenolic acid B

Details

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Internal ID d7f1d2aa-2ddc-4995-a470-e34dd2dfb3ee
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Cycloartanols and derivatives
IUPAC Name (1S,3S,4S,6S,7S,8R,11S,12S,15R,16R)-4,6-dihydroxy-7,12,16-trimethyl-15-[(2R)-6-methyl-4-oxohept-5-en-2-yl]pentacyclo[9.7.0.01,3.03,8.012,16]octadecane-7-carboxylic acid
SMILES (Canonical) CC(CC(=O)C=C(C)C)C1CCC2(C1(CCC34C2CCC5C3(C4)C(CC(C5(C)C(=O)O)O)O)C)C
SMILES (Isomeric) C[C@H](CC(=O)C=C(C)C)[C@H]1CC[C@@]2([C@@]1(CC[C@]34[C@H]2CC[C@@H]5[C@]3(C4)[C@H](C[C@@H]([C@@]5(C)C(=O)O)O)O)C)C
InChI InChI=1S/C30H46O5/c1-17(2)13-19(31)14-18(3)20-9-10-27(5)21-7-8-22-28(6,25(34)35)23(32)15-24(33)30(22)16-29(21,30)12-11-26(20,27)4/h13,18,20-24,32-33H,7-12,14-16H2,1-6H3,(H,34,35)/t18-,20-,21+,22+,23+,24+,26-,27+,28+,29+,30-/m1/s1
InChI Key TTYDGCKGPQOMOK-SESPQYOESA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H46O5
Molecular Weight 486.70 g/mol
Exact Mass 486.33452456 g/mol
Topological Polar Surface Area (TPSA) 94.80 Ų
XlogP 6.50
Atomic LogP (AlogP) 5.38
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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108864-53-5
(1S,3S,4S,6S,7S,8R,11S,12S,15R,16R)-4,6-dihydroxy-7,12,16-trimethyl-15-[(2R)-6-methyl-4-oxohept-5-en-2-yl]pentacyclo[9.7.0.01,3.03,8.012,16]octadecane-7-carboxylic acid
CHEMBL558118
AKOS032962759

2D Structure

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2D Structure of Gardenolic acid B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9820 98.20%
Caco-2 - 0.6166 61.66%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.7290 72.90%
OATP2B1 inhibitior - 0.7163 71.63%
OATP1B1 inhibitior + 0.8617 86.17%
OATP1B3 inhibitior + 0.7927 79.27%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7782 77.82%
BSEP inhibitior + 0.8244 82.44%
P-glycoprotein inhibitior - 0.5365 53.65%
P-glycoprotein substrate - 0.5120 51.20%
CYP3A4 substrate + 0.6629 66.29%
CYP2C9 substrate - 0.7791 77.91%
CYP2D6 substrate - 0.8966 89.66%
CYP3A4 inhibition - 0.8182 81.82%
CYP2C9 inhibition - 0.6698 66.98%
CYP2C19 inhibition - 0.8814 88.14%
CYP2D6 inhibition - 0.9569 95.69%
CYP1A2 inhibition - 0.8942 89.42%
CYP2C8 inhibition - 0.5933 59.33%
CYP inhibitory promiscuity - 0.8675 86.75%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6907 69.07%
Eye corrosion - 0.9936 99.36%
Eye irritation - 0.9486 94.86%
Skin irritation + 0.5815 58.15%
Skin corrosion - 0.9398 93.98%
Ames mutagenesis - 0.6628 66.28%
Human Ether-a-go-go-Related Gene inhibition - 0.4046 40.46%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.6017 60.17%
skin sensitisation - 0.7228 72.28%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.9889 98.89%
Mitochondrial toxicity + 0.9750 97.50%
Nephrotoxicity - 0.7124 71.24%
Acute Oral Toxicity (c) I 0.6906 69.06%
Estrogen receptor binding + 0.7892 78.92%
Androgen receptor binding + 0.7750 77.50%
Thyroid receptor binding + 0.6393 63.93%
Glucocorticoid receptor binding + 0.7743 77.43%
Aromatase binding + 0.8184 81.84%
PPAR gamma + 0.6068 60.68%
Honey bee toxicity - 0.7950 79.50%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.9968 99.68%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.75% 96.09%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 94.54% 96.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.04% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.51% 97.25%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 91.57% 96.38%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 90.64% 93.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.09% 91.11%
CHEMBL221 P23219 Cyclooxygenase-1 89.39% 90.17%
CHEMBL340 P08684 Cytochrome P450 3A4 87.88% 91.19%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 86.53% 96.47%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 86.41% 95.17%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.21% 100.00%
CHEMBL2581 P07339 Cathepsin D 82.84% 98.95%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 82.55% 98.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.38% 97.09%
CHEMBL2514 O95665 Neurotensin receptor 2 81.24% 100.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.86% 97.21%
CHEMBL5028 O14672 ADAM10 80.71% 97.50%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 80.46% 89.34%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.06% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides
Kleinhovia hospita

Cross-Links

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PubChem 45273405
NPASS NPC312900
LOTUS LTS0068349
wikiData Q104397811