Garcinialiptone B

Details

Top
Internal ID c78a3631-c926-4e57-811e-e782ed182ad8
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Monoterpenoids > Aromatic monoterpenoids
IUPAC Name (1R,3S,4S,9S,11S)-7-(3,4-dihydroxybenzoyl)-10,10-dimethyl-9,11-bis(3-methylbut-2-enyl)-4-(2-methylprop-1-enyl)-3-prop-1-en-2-yl-5-oxatricyclo[7.3.1.01,6]tridec-6-ene-8,13-dione
SMILES (Canonical) CC(=CCC1CC23CC(C(OC2=C(C(=O)C(C3=O)(C1(C)C)CC=C(C)C)C(=O)C4=CC(=C(C=C4)O)O)C=C(C)C)C(=C)C)C
SMILES (Isomeric) CC(=CC[C@H]1C[C@@]23C[C@H]([C@@H](OC2=C(C(=O)[C@](C3=O)(C1(C)C)CC=C(C)C)C(=O)C4=CC(=C(C=C4)O)O)C=C(C)C)C(=C)C)C
InChI InChI=1S/C38H48O6/c1-21(2)11-13-26-19-37-20-27(24(7)8)30(17-23(5)6)44-34(37)31(32(41)25-12-14-28(39)29(40)18-25)33(42)38(35(37)43,36(26,9)10)16-15-22(3)4/h11-12,14-15,17-18,26-27,30,39-40H,7,13,16,19-20H2,1-6,8-10H3/t26-,27-,30-,37+,38+/m0/s1
InChI Key AFHKVDYTQYGRHC-JVFVNDAQSA-N
Popularity 4 references in papers

Physical and Chemical Properties

Top
Molecular Formula C38H48O6
Molecular Weight 600.80 g/mol
Exact Mass 600.34508925 g/mol
Topological Polar Surface Area (TPSA) 101.00 Ų
XlogP 9.10
Atomic LogP (AlogP) 8.37
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 8

Synonyms

Top
(1R,3S,4S,9S,11S)-7-(3,4-dihydroxybenzoyl)-10,10-dimethyl-9,11-bis(3-methylbut-2-enyl)-4-(2-methylprop-1-enyl)-3-prop-1-en-2-yl-5-oxatricyclo(7.3.1.01,6)tridec-6-ene-8,13-dione
(1R,3S,4S,9S,11S)-7-(3,4-dihydroxybenzoyl)-10,10-dimethyl-9,11-bis(3-methylbut-2-enyl)-4-(2-methylprop-1-enyl)-3-prop-1-en-2-yl-5-oxatricyclo[7.3.1.01,6]tridec-6-ene-8,13-dione
RefChem:142651
1220854-30-7
CHEMBL1077025
SCHEMBL31237656

2D Structure

Top
2D Structure of Garcinialiptone B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9835 98.35%
Caco-2 - 0.7890 78.90%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.7789 77.89%
OATP2B1 inhibitior - 0.5707 57.07%
OATP1B1 inhibitior + 0.8633 86.33%
OATP1B3 inhibitior + 0.9487 94.87%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9132 91.32%
P-glycoprotein inhibitior + 0.7451 74.51%
P-glycoprotein substrate + 0.6048 60.48%
CYP3A4 substrate + 0.6553 65.53%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8118 81.18%
CYP3A4 inhibition - 0.8776 87.76%
CYP2C9 inhibition + 0.6889 68.89%
CYP2C19 inhibition + 0.6215 62.15%
CYP2D6 inhibition - 0.8301 83.01%
CYP1A2 inhibition - 0.5000 50.00%
CYP2C8 inhibition + 0.6813 68.13%
CYP inhibitory promiscuity - 0.5571 55.71%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7000 70.00%
Eye corrosion - 0.9855 98.55%
Eye irritation - 0.8845 88.45%
Skin irritation - 0.6451 64.51%
Skin corrosion - 0.8842 88.42%
Ames mutagenesis + 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4062 40.62%
Micronuclear - 0.5200 52.00%
Hepatotoxicity + 0.5177 51.77%
skin sensitisation - 0.6466 64.66%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity - 0.6438 64.38%
Acute Oral Toxicity (c) III 0.6716 67.16%
Estrogen receptor binding + 0.7285 72.85%
Androgen receptor binding + 0.7471 74.71%
Thyroid receptor binding + 0.6298 62.98%
Glucocorticoid receptor binding + 0.7306 73.06%
Aromatase binding + 0.6954 69.54%
PPAR gamma + 0.6671 66.71%
Honey bee toxicity - 0.7275 72.75%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9973 99.73%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.13% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 96.62% 91.49%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 93.84% 93.40%
CHEMBL221 P23219 Cyclooxygenase-1 93.61% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.10% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.73% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 88.31% 94.73%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.71% 100.00%
CHEMBL2581 P07339 Cathepsin D 86.04% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.51% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.74% 92.94%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.53% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.50% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.50% 96.09%
CHEMBL340 P08684 Cytochrome P450 3A4 83.40% 91.19%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.01% 90.71%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.79% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.26% 99.17%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia cowa
Garcinia esculenta
Garcinia paucinervis
Garcinia subelliptica

Cross-Links

Top
PubChem 46184557
NPASS NPC46549
ChEMBL CHEMBL1077025
LOTUS LTS0113971
wikiData Q104911225