Garciduol C

Details

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Internal ID 74b63253-c038-49e4-848b-bdeafece14ff
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 4-(3-benzoyl-2,4-dihydroxy-6-methoxyphenyl)-1,2,5-trihydroxyxanthen-9-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H18O9/c1-35-18-11-16(29)20(22(31)12-6-3-2-4-7-12)25(34)19(18)14-10-17(30)24(33)21-23(32)13-8-5-9-15(28)26(13)36-27(14)21/h2-11,28-30,33-34H,1H3
InChI Key HPYVBXILLKDBSO-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C27H18O9
Molecular Weight 486.40 g/mol
Exact Mass 486.09508215 g/mol
Topological Polar Surface Area (TPSA) 154.00 Ų
XlogP 5.20
Atomic LogP (AlogP) 4.38
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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4-(3-benzoyl-2,4-dihydroxy-6-methoxyphenyl)-1,2,5-trihydroxy-9H-xanthen-9-one
CHEBI:192466
DTXSID601140039
182127-82-8
4-(3-benzoyl-2,4-dihydroxy-6-methoxyphenyl)-1,2,5-trihydroxyxanthen-9-one

2D Structure

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2D Structure of Garciduol C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8594 85.94%
Caco-2 - 0.8473 84.73%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability + 0.7000 70.00%
Subcellular localzation Mitochondria 0.6266 62.66%
OATP2B1 inhibitior + 0.5807 58.07%
OATP1B1 inhibitior + 0.8782 87.82%
OATP1B3 inhibitior + 0.9943 99.43%
MATE1 inhibitior - 0.5600 56.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.6663 66.63%
P-glycoprotein inhibitior + 0.7550 75.50%
P-glycoprotein substrate - 0.5510 55.10%
CYP3A4 substrate + 0.6150 61.50%
CYP2C9 substrate - 0.8190 81.90%
CYP2D6 substrate - 0.8368 83.68%
CYP3A4 inhibition - 0.5977 59.77%
CYP2C9 inhibition - 0.7440 74.40%
CYP2C19 inhibition - 0.7781 77.81%
CYP2D6 inhibition - 0.8980 89.80%
CYP1A2 inhibition + 0.8528 85.28%
CYP2C8 inhibition + 0.8856 88.56%
CYP inhibitory promiscuity - 0.5168 51.68%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6374 63.74%
Eye corrosion - 0.9847 98.47%
Eye irritation - 0.6513 65.13%
Skin irritation - 0.6474 64.74%
Skin corrosion - 0.8948 89.48%
Ames mutagenesis + 0.6277 62.77%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear + 0.8900 89.00%
Hepatotoxicity + 0.5250 52.50%
skin sensitisation - 0.9231 92.31%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.6635 66.35%
Acute Oral Toxicity (c) III 0.6205 62.05%
Estrogen receptor binding + 0.8519 85.19%
Androgen receptor binding + 0.7696 76.96%
Thyroid receptor binding - 0.6179 61.79%
Glucocorticoid receptor binding + 0.7212 72.12%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7680 76.80%
Honey bee toxicity - 0.8919 89.19%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5351 53.51%
Fish aquatic toxicity + 0.8949 89.49%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.45% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 97.00% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.78% 95.56%
CHEMBL1255126 O15151 Protein Mdm4 94.89% 90.20%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 94.53% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.41% 89.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 94.13% 93.99%
CHEMBL2535 P11166 Glucose transporter 93.35% 98.75%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 93.35% 95.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.77% 94.00%
CHEMBL3194 P02766 Transthyretin 92.43% 90.71%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.47% 99.17%
CHEMBL2581 P07339 Cathepsin D 90.93% 98.95%
CHEMBL2002 P12268 Inosine-5'-monophosphate dehydrogenase 2 86.43% 98.21%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 86.12% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 83.92% 94.73%
CHEMBL1907 P15144 Aminopeptidase N 82.29% 93.31%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.06% 96.00%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 80.10% 94.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia dulcis

Cross-Links

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PubChem 10672572
LOTUS LTS0269119
wikiData Q105032058