Ganefromycin alpha

Details

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Internal ID 347ffeca-b524-412e-8013-cb9166a9b040
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Oligosaccharides
IUPAC Name (2E,4E,6E)-7-[5-[(4E,6E)-8-[[(2S)-2-[(2R,3R,4R,6S)-2,4-dihydroxy-5,5-dimethyl-6-[(1E,3Z)-penta-1,3-dienyl]-3-(2-phenylacetyl)oxyoxan-2-yl]-3-[(2R,4S,5R,6S)-5-[(2R,4R,5S,6S)-5-[(2S,4S,5R,6S)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxypropanoyl]amino]-3-methoxy-4-methylocta-4,6-dien-2-yl]-3-hydroxyoxolan-2-yl]hepta-2,4,6-trienoic acid
SMILES (Canonical) CC=CC=CC1C(C(C(C(O1)(C(COC2CC(C(C(O2)C)OC3CC(C(C(O3)C)OC4CC(C(C(O4)C)O)OC)OC)OC)C(=O)NCC=CC=C(C)C(C(C)C5CC(C(O5)C=CC=CC=CC(=O)O)O)OC)O)OC(=O)CC6=CC=CC=C6)O)(C)C
SMILES (Isomeric) C/C=C\C=C\[C@H]1C([C@H]([C@H]([C@](O1)([C@H](CO[C@H]2C[C@@H]([C@@H]([C@@H](O2)C)O[C@@H]3C[C@H]([C@H]([C@@H](O3)C)O[C@H]4C[C@@H]([C@@H]([C@@H](O4)C)O)OC)OC)OC)C(=O)NC/C=C/C=C(\C)/C(C(C)C5CC(C(O5)/C=C/C=C/C=C/C(=O)O)O)OC)O)OC(=O)CC6=CC=CC=C6)O)(C)C
InChI InChI=1S/C65H95NO21/c1-13-14-18-29-51-64(7,8)61(72)62(84-53(70)32-43-26-19-17-20-27-43)65(74,87-51)44(63(73)66-31-24-23-25-38(2)58(78-12)39(3)47-33-45(67)46(83-47)28-21-15-16-22-30-52(68)69)37-79-54-35-49(76-10)59(41(5)81-54)86-56-36-50(77-11)60(42(6)82-56)85-55-34-48(75-9)57(71)40(4)80-55/h13-30,39-42,44-51,54-62,67,71-72,74H,31-37H2,1-12H3,(H,66,73)(H,68,69)/b14-13-,16-15+,24-23+,28-21+,29-18+,30-22+,38-25+/t39?,40-,41-,42-,44+,45?,46?,47?,48-,49-,50+,51-,54+,55-,56+,57+,58?,59+,60-,61-,62+,65+/m0/s1
InChI Key UDVVGDCMWCVRCO-HQDNJGEPSA-N
Popularity 6 references in papers

Physical and Chemical Properties

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Molecular Formula C65H95NO21
Molecular Weight 1226.40 g/mol
Exact Mass 1225.63965904 g/mol
Topological Polar Surface Area (TPSA) 284.00 Ų
XlogP 6.10
Atomic LogP (AlogP) 5.50
H-Bond Acceptor 20
H-Bond Donor 6
Rotatable Bonds 28

Synonyms

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CHEMBL500158

2D Structure

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2D Structure of Ganefromycin alpha

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7810 78.10%
Caco-2 - 0.8616 86.16%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7108 71.08%
OATP2B1 inhibitior - 0.8646 86.46%
OATP1B1 inhibitior + 0.8108 81.08%
OATP1B3 inhibitior + 0.9370 93.70%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9788 97.88%
P-glycoprotein inhibitior + 0.7460 74.60%
P-glycoprotein substrate + 0.8436 84.36%
CYP3A4 substrate + 0.7474 74.74%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8814 88.14%
CYP3A4 inhibition - 0.7812 78.12%
CYP2C9 inhibition - 0.8334 83.34%
CYP2C19 inhibition - 0.8308 83.08%
CYP2D6 inhibition - 0.8731 87.31%
CYP1A2 inhibition - 0.8145 81.45%
CYP2C8 inhibition + 0.8045 80.45%
CYP inhibitory promiscuity - 0.7976 79.76%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5512 55.12%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.8984 89.84%
Skin irritation - 0.7655 76.55%
Skin corrosion - 0.9358 93.58%
Ames mutagenesis - 0.5678 56.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7660 76.60%
Micronuclear + 0.6400 64.00%
Hepatotoxicity - 0.5947 59.47%
skin sensitisation - 0.8219 82.19%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.7911 79.11%
Acute Oral Toxicity (c) III 0.6049 60.49%
Estrogen receptor binding + 0.7778 77.78%
Androgen receptor binding + 0.7313 73.13%
Thyroid receptor binding + 0.6924 69.24%
Glucocorticoid receptor binding + 0.8083 80.83%
Aromatase binding + 0.6137 61.37%
PPAR gamma + 0.8359 83.59%
Honey bee toxicity - 0.6094 60.94%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.6900 69.00%
Fish aquatic toxicity + 0.8524 85.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.65% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.50% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 98.01% 90.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.86% 85.14%
CHEMBL2581 P07339 Cathepsin D 95.80% 98.95%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 95.01% 95.50%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 93.03% 94.08%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 92.13% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.08% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.01% 95.89%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 91.61% 88.00%
CHEMBL5028 O14672 ADAM10 90.23% 97.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.05% 97.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.75% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 87.70% 94.73%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 87.11% 94.23%
CHEMBL226 P30542 Adenosine A1 receptor 85.46% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.14% 89.00%
CHEMBL245 P20309 Muscarinic acetylcholine receptor M3 84.95% 97.53%
CHEMBL2815 P04629 Nerve growth factor receptor Trk-A 84.03% 87.16%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.78% 91.07%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 83.10% 97.33%
CHEMBL340 P08684 Cytochrome P450 3A4 82.91% 91.19%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.04% 93.00%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 81.91% 94.62%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.69% 93.03%
CHEMBL1859 O95180 Voltage-gated T-type calcium channel alpha-1H subunit 81.15% 98.57%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.09% 100.00%
CHEMBL4208 P20618 Proteasome component C5 80.84% 90.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.59% 99.23%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.55% 99.17%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 80.17% 83.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cryptocarya concinna

Cross-Links

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PubChem 44584259
LOTUS LTS0248578
wikiData Q104915957