Gambogoic acid B

Details

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Internal ID 93c2c40f-46f8-4f82-b118-524f0dd78e34
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > Pyranoxanthones
IUPAC Name 4-[16-ethoxy-12-hydroxy-8,21,21-trimethyl-5-(3-methylbut-2-enyl)-8-(4-methylpent-3-enyl)-14,18-dioxo-3,7,20-trioxahexacyclo[15.4.1.02,15.02,19.04,13.06,11]docosa-4(13),5,9,11-tetraen-19-yl]-2-methylbut-2-enoic acid
SMILES (Canonical) CCOC1C2CC3C(OC(C2=O)(C34C1C(=O)C5=C(O4)C(=C6C(=C5O)C=CC(O6)(C)CCC=C(C)C)CC=C(C)C)CC=C(C)C(=O)O)(C)C
SMILES (Isomeric) CCOC1C2CC3C(OC(C2=O)(C34C1C(=O)C5=C(O4)C(=C6C(=C5O)C=CC(O6)(C)CCC=C(C)C)CC=C(C)C)CC=C(C)C(=O)O)(C)C
InChI InChI=1S/C40H50O9/c1-10-46-34-26-20-27-37(7,8)49-39(35(26)43,19-15-23(6)36(44)45)40(27)29(34)31(42)28-30(41)24-16-18-38(9,17-11-12-21(2)3)47-32(24)25(33(28)48-40)14-13-22(4)5/h12-13,15-16,18,26-27,29,34,41H,10-11,14,17,19-20H2,1-9H3,(H,44,45)
InChI Key WMAGOAMNTBBBCL-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C40H50O9
Molecular Weight 674.80 g/mol
Exact Mass 674.34548317 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP 7.30
Atomic LogP (AlogP) 7.33
H-Bond Acceptor 8
H-Bond Donor 2
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Gambogoic acid B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9763 97.63%
Caco-2 - 0.8054 80.54%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8505 85.05%
OATP2B1 inhibitior - 0.5766 57.66%
OATP1B1 inhibitior - 0.5000 50.00%
OATP1B3 inhibitior + 0.8260 82.60%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.9963 99.63%
P-glycoprotein inhibitior + 0.8299 82.99%
P-glycoprotein substrate + 0.6460 64.60%
CYP3A4 substrate + 0.7180 71.80%
CYP2C9 substrate - 0.6000 60.00%
CYP2D6 substrate - 0.8689 86.89%
CYP3A4 inhibition - 0.7115 71.15%
CYP2C9 inhibition + 0.5123 51.23%
CYP2C19 inhibition - 0.5640 56.40%
CYP2D6 inhibition - 0.8686 86.86%
CYP1A2 inhibition + 0.5391 53.91%
CYP2C8 inhibition + 0.7816 78.16%
CYP inhibitory promiscuity - 0.5155 51.55%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5332 53.32%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9080 90.80%
Skin irritation - 0.6562 65.62%
Skin corrosion - 0.9359 93.59%
Ames mutagenesis - 0.6237 62.37%
Human Ether-a-go-go-Related Gene inhibition + 0.6547 65.47%
Micronuclear - 0.7000 70.00%
Hepatotoxicity - 0.5625 56.25%
skin sensitisation - 0.8366 83.66%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity - 0.8228 82.28%
Acute Oral Toxicity (c) III 0.4027 40.27%
Estrogen receptor binding + 0.8120 81.20%
Androgen receptor binding + 0.7747 77.47%
Thyroid receptor binding + 0.6287 62.87%
Glucocorticoid receptor binding + 0.8473 84.73%
Aromatase binding + 0.7450 74.50%
PPAR gamma + 0.7372 73.72%
Honey bee toxicity - 0.7088 70.88%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9965 99.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.47% 91.11%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 99.01% 95.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.69% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.31% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.56% 97.09%
CHEMBL2581 P07339 Cathepsin D 95.34% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 94.36% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.06% 96.09%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 91.81% 89.34%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.32% 99.17%
CHEMBL284 P27487 Dipeptidyl peptidase IV 90.83% 95.69%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.38% 86.33%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 89.77% 95.50%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.21% 99.23%
CHEMBL1929 P47989 Xanthine dehydrogenase 88.05% 96.12%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.15% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 87.11% 94.73%
CHEMBL340 P08684 Cytochrome P450 3A4 86.89% 91.19%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 86.89% 85.30%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.46% 95.89%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 85.34% 96.38%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.68% 96.00%
CHEMBL221 P23219 Cyclooxygenase-1 84.17% 90.17%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 81.36% 97.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia hanburyi

Cross-Links

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PubChem 74318617
LOTUS LTS0236721
wikiData Q105308402