Gaertneroside

Details

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Internal ID 350c5fae-392d-4d43-943b-6b387ff5a81d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1R,4aS,7R,7aS)-4'-[hydroxy-(4-hydroxyphenyl)methyl]-5'-oxo-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[4a,7a-dihydro-1H-cyclopenta[c]pyran-7,2'-furan]-4-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1C=CC23C=C(C(=O)O3)C(C4=CC=C(C=C4)O)O)OC5C(C(C(C(O5)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@@H]([C@H]2[C@@H]1C=C[C@@]23C=C(C(=O)O3)C(C4=CC=C(C=C4)O)O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O
InChI InChI=1S/C26H28O13/c1-35-22(33)15-10-36-24(38-25-21(32)20(31)19(30)16(9-27)37-25)17-13(15)6-7-26(17)8-14(23(34)39-26)18(29)11-2-4-12(28)5-3-11/h2-8,10,13,16-21,24-25,27-32H,9H2,1H3/t13-,16-,17-,18?,19-,20+,21-,24-,25+,26-/m1/s1
InChI Key HGHZVZYRYYMUTI-WGYUZEAXSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C26H28O13
Molecular Weight 548.50 g/mol
Exact Mass 548.15299094 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -1.32
H-Bond Acceptor 13
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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CHEMBL507679

2D Structure

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2D Structure of Gaertneroside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7577 75.77%
Caco-2 - 0.9160 91.60%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7037 70.37%
OATP2B1 inhibitior - 0.8438 84.38%
OATP1B1 inhibitior + 0.7371 73.71%
OATP1B3 inhibitior + 0.9620 96.20%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.5850 58.50%
P-glycoprotein inhibitior - 0.5105 51.05%
P-glycoprotein substrate + 0.5226 52.26%
CYP3A4 substrate + 0.6909 69.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8603 86.03%
CYP3A4 inhibition - 0.8655 86.55%
CYP2C9 inhibition - 0.7707 77.07%
CYP2C19 inhibition - 0.7641 76.41%
CYP2D6 inhibition - 0.9005 90.05%
CYP1A2 inhibition - 0.8652 86.52%
CYP2C8 inhibition + 0.6772 67.72%
CYP inhibitory promiscuity - 0.6292 62.92%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.4952 49.52%
Eye corrosion - 0.9873 98.73%
Eye irritation - 0.9153 91.53%
Skin irritation - 0.7627 76.27%
Skin corrosion - 0.9384 93.84%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4320 43.20%
Micronuclear + 0.5633 56.33%
Hepatotoxicity - 0.6207 62.07%
skin sensitisation - 0.8145 81.45%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity + 0.6909 69.09%
Acute Oral Toxicity (c) III 0.5234 52.34%
Estrogen receptor binding + 0.7682 76.82%
Androgen receptor binding + 0.6832 68.32%
Thyroid receptor binding + 0.5749 57.49%
Glucocorticoid receptor binding + 0.6680 66.80%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6727 67.27%
Honey bee toxicity - 0.7371 73.71%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity + 0.8306 83.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 99.43% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.77% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.92% 96.09%
CHEMBL2581 P07339 Cathepsin D 97.45% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.86% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.55% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 90.32% 94.73%
CHEMBL4208 P20618 Proteasome component C5 90.08% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.89% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.77% 95.56%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 87.01% 89.67%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.01% 99.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.23% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.32% 96.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.71% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Morinda morindoides
Prismatomeris tetrandra

Cross-Links

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PubChem 44559436
LOTUS LTS0017243
wikiData Q104399071