Polydiscamide B

Details

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Internal ID 95b713a4-9ead-41d9-a5a6-f3fcf326e777
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name 2-[(3R,6S,9S,10R,13R,16S)-6-(3-amino-3-oxopropyl)-9-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2R)-2-[[(2S)-1-[(2S)-3-(4-bromophenyl)-2-[[(2R)-2-formamidopropanoyl]amino]propanoyl]pyrrolidine-2-carbonyl]amino]-3,3-dimethylbutanoyl]amino]-3,3-dimethylpentanoyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-3-sulfopropanoyl]amino]-7,10-dimethyl-2,5,8,12,15-pentaoxo-3-propan-2-yl-11-oxa-1,4,7,14-tetrazabicyclo[14.3.0]nonadecan-13-yl]acetic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C75H109BrN18O21S/c1-12-75(9,10)59(91-67(106)58(74(6,7)8)90-66(105)53-22-16-30-93(53)69(108)48(85-60(99)39(4)82-37-95)32-41-23-25-43(76)26-24-41)68(107)84-47(33-42-35-81-45-19-14-13-18-44(42)45)62(101)83-46(20-15-29-80-73(78)79)61(100)87-50(36-116(112,113)114)63(102)89-57-40(5)115-72(111)49(34-55(97)98)86-65(104)52-21-17-31-94(52)71(110)56(38(2)3)88-64(103)51(27-28-54(77)96)92(11)70(57)109/h13-14,18-19,23-26,35,37-40,46-53,56-59,81H,12,15-17,20-22,27-34,36H2,1-11H3,(H2,77,96)(H,82,95)(H,83,101)(H,84,107)(H,85,99)(H,86,104)(H,87,100)(H,88,103)(H,89,102)(H,90,105)(H,91,106)(H,97,98)(H4,78,79,80)(H,112,113,114)/t39-,40-,46+,47-,48+,49-,50-,51+,52+,53+,56-,57+,58+,59-/m1/s1
InChI Key SVMYZZWGWZMWMH-SRZFOLISSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C75H109BrN18O21S
Molecular Weight 1710.70 g/mol
Exact Mass 1708.69188 g/mol
Topological Polar Surface Area (TPSA) 602.00 Ų
XlogP 0.80
Atomic LogP (AlogP) -2.21
H-Bond Acceptor 20
H-Bond Donor 16
Rotatable Bonds 35

Synonyms

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Q15424804

2D Structure

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2D Structure of Polydiscamide B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8308 83.08%
Caco-2 - 0.8629 86.29%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Lysosomes 0.5029 50.29%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7997 79.97%
OATP1B3 inhibitior + 0.9263 92.63%
MATE1 inhibitior - 0.7609 76.09%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.9655 96.55%
P-glycoprotein inhibitior + 0.7419 74.19%
P-glycoprotein substrate + 0.8735 87.35%
CYP3A4 substrate + 0.7662 76.62%
CYP2C9 substrate + 0.5974 59.74%
CYP2D6 substrate - 0.8504 85.04%
CYP3A4 inhibition - 0.6448 64.48%
CYP2C9 inhibition - 0.6963 69.63%
CYP2C19 inhibition - 0.6529 65.29%
CYP2D6 inhibition - 0.8477 84.77%
CYP1A2 inhibition - 0.6999 69.99%
CYP2C8 inhibition + 0.8558 85.58%
CYP inhibitory promiscuity - 0.8364 83.64%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) + 0.5100 51.00%
Carcinogenicity (trinary) Non-required 0.5604 56.04%
Eye corrosion - 0.9757 97.57%
Eye irritation - 0.8953 89.53%
Skin irritation - 0.7553 75.53%
Skin corrosion - 0.9081 90.81%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7107 71.07%
Micronuclear + 0.8900 89.00%
Hepatotoxicity - 0.5277 52.77%
skin sensitisation - 0.8253 82.53%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.8424 84.24%
Acute Oral Toxicity (c) III 0.5745 57.45%
Estrogen receptor binding - 0.5782 57.82%
Androgen receptor binding + 0.7340 73.40%
Thyroid receptor binding + 0.8236 82.36%
Glucocorticoid receptor binding + 0.8510 85.10%
Aromatase binding + 0.8284 82.84%
PPAR gamma + 0.7861 78.61%
Honey bee toxicity - 0.6060 60.60%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9899 98.99%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL333 P08253 Matrix metalloproteinase-2 99.98% 96.31%
CHEMBL2581 P07339 Cathepsin D 99.92% 98.95%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 99.65% 97.64%
CHEMBL3837 P07711 Cathepsin L 99.54% 96.61%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 99.40% 98.33%
CHEMBL4588 P22894 Matrix metalloproteinase 8 99.31% 94.66%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 99.18% 95.56%
CHEMBL261 P00915 Carbonic anhydrase I 99.16% 96.76%
CHEMBL5103 Q969S8 Histone deacetylase 10 99.15% 90.08%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.05% 96.09%
CHEMBL321 P14780 Matrix metalloproteinase 9 98.92% 92.12%
CHEMBL259 P32245 Melanocortin receptor 4 98.47% 95.38%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.81% 91.11%
CHEMBL4644 P41968 Melanocortin receptor 3 97.77% 99.52%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 97.57% 82.38%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 97.23% 88.42%
CHEMBL3729 P22748 Carbonic anhydrase IV 96.53% 99.23%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 96.31% 97.31%
CHEMBL5608 Q16288 NT-3 growth factor receptor 96.00% 95.89%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 95.98% 90.93%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 95.34% 96.47%
CHEMBL4979 P13866 Sodium/glucose cotransporter 1 95.31% 98.24%
CHEMBL325 Q13547 Histone deacetylase 1 94.80% 95.92%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.78% 97.09%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 94.15% 91.81%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 93.66% 97.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.61% 89.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 93.06% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 92.99% 94.75%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 92.77% 96.90%
CHEMBL3310 Q96DB2 Histone deacetylase 11 92.75% 88.56%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 92.68% 93.00%
CHEMBL2514 O95665 Neurotensin receptor 2 92.57% 100.00%
CHEMBL4123 P30989 Neurotensin receptor 1 91.63% 96.67%
CHEMBL3359 P21462 Formyl peptide receptor 1 91.62% 93.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.47% 99.17%
CHEMBL4393 P39900 Matrix metalloproteinase 12 91.39% 92.22%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.77% 99.23%
CHEMBL5028 O14672 ADAM10 90.53% 97.50%
CHEMBL3524 P56524 Histone deacetylase 4 90.48% 92.97%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 90.30% 100.00%
CHEMBL4073 P09237 Matrix metalloproteinase 7 90.17% 97.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.94% 97.14%
CHEMBL284 P27487 Dipeptidyl peptidase IV 89.85% 95.69%
CHEMBL4801 P29466 Caspase-1 89.32% 96.85%
CHEMBL2535 P11166 Glucose transporter 89.26% 98.75%
CHEMBL230 P35354 Cyclooxygenase-2 88.39% 89.63%
CHEMBL205 P00918 Carbonic anhydrase II 88.06% 98.44%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 87.70% 96.38%
CHEMBL1293287 P14735 Insulin-degrading enzyme 87.40% 88.10%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 87.07% 93.03%
CHEMBL5939 Q9NZ08 Endoplasmic reticulum aminopeptidase 1 86.35% 100.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.27% 82.69%
CHEMBL283 P08254 Matrix metalloproteinase 3 86.03% 97.29%
CHEMBL2094135 Q96BI3 Gamma-secretase 85.83% 98.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.48% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.36% 94.00%
CHEMBL4777 P25929 Neuropeptide Y receptor type 1 84.87% 96.67%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 84.83% 95.00%
CHEMBL1914 P06276 Butyrylcholinesterase 84.62% 95.00%
CHEMBL2179 P04062 Beta-glucocerebrosidase 82.77% 85.31%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 82.62% 96.11%
CHEMBL1907599 P05556 Integrin alpha-4/beta-1 82.06% 92.86%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 82.00% 97.50%
CHEMBL5203 P33316 dUTP pyrophosphatase 81.82% 99.18%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.43% 97.25%
CHEMBL1781 P11387 DNA topoisomerase I 81.42% 97.00%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 81.24% 95.48%
CHEMBL4361 Q07820 Induced myeloid leukemia cell differentiation protein Mcl-1 80.94% 95.52%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 80.80% 95.71%
CHEMBL4608 P33032 Melanocortin receptor 5 80.11% 97.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.05% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 25077700
LOTUS LTS0229268
wikiData Q15424804