(2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-17-[(E,4S)-4-[(2S)-3,3-dimethyloxiran-2-yl]-4-methoxybut-2-en-2-yl]-12-hydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID a5e23f2a-445f-4d42-a73e-7b2f4332ba8a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-17-[(E,4S)-4-[(2S)-3,3-dimethyloxiran-2-yl]-4-methoxybut-2-en-2-yl]-12-hydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C43H72O14/c1-20(16-23(52-9)36-40(4,5)57-36)21-10-14-43(8)29(21)22(46)17-27-41(6)13-12-28(39(2,3)26(41)11-15-42(27,43)7)55-38-35(33(50)31(48)25(19-45)54-38)56-37-34(51)32(49)30(47)24(18-44)53-37/h16,21-38,44-51H,10-15,17-19H2,1-9H3/b20-16+/t21-,22-,23+,24-,25-,26+,27-,28+,29+,30-,31-,32+,33+,34-,35-,36+,37+,38+,41+,42-,43-/m1/s1
InChI Key ZOHMNPZMSAKKAA-BEVNTBLTSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C43H72O14
Molecular Weight 813.00 g/mol
Exact Mass 812.49220697 g/mol
Topological Polar Surface Area (TPSA) 221.00 Ų
XlogP 3.40
Atomic LogP (AlogP) 1.79
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-17-[(E,4S)-4-[(2S)-3,3-dimethyloxiran-2-yl]-4-methoxybut-2-en-2-yl]-12-hydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6830 68.30%
Caco-2 - 0.8881 88.81%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6785 67.85%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8275 82.75%
OATP1B3 inhibitior + 0.8978 89.78%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.5624 56.24%
P-glycoprotein inhibitior + 0.7726 77.26%
P-glycoprotein substrate - 0.6620 66.20%
CYP3A4 substrate + 0.7319 73.19%
CYP2C9 substrate - 0.8034 80.34%
CYP2D6 substrate - 0.8362 83.62%
CYP3A4 inhibition - 0.9394 93.94%
CYP2C9 inhibition - 0.7771 77.71%
CYP2C19 inhibition - 0.8433 84.33%
CYP2D6 inhibition - 0.9241 92.41%
CYP1A2 inhibition - 0.8723 87.23%
CYP2C8 inhibition + 0.6518 65.18%
CYP inhibitory promiscuity - 0.9442 94.42%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6429 64.29%
Eye corrosion - 0.9877 98.77%
Eye irritation - 0.9118 91.18%
Skin irritation - 0.6561 65.61%
Skin corrosion - 0.9393 93.93%
Ames mutagenesis - 0.7454 74.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8740 87.40%
Micronuclear - 0.7000 70.00%
Hepatotoxicity - 0.8479 84.79%
skin sensitisation - 0.8673 86.73%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7062 70.62%
Acute Oral Toxicity (c) I 0.5658 56.58%
Estrogen receptor binding + 0.7584 75.84%
Androgen receptor binding + 0.7509 75.09%
Thyroid receptor binding - 0.5724 57.24%
Glucocorticoid receptor binding + 0.7006 70.06%
Aromatase binding + 0.6794 67.94%
PPAR gamma + 0.7524 75.24%
Honey bee toxicity - 0.5286 52.86%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.8551 85.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.76% 91.11%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 95.48% 95.58%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.23% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.15% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.10% 97.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.03% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.46% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.45% 95.89%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 87.95% 92.86%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 87.55% 97.47%
CHEMBL226 P30542 Adenosine A1 receptor 87.14% 95.93%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.39% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.35% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.34% 100.00%
CHEMBL237 P41145 Kappa opioid receptor 85.13% 98.10%
CHEMBL2996 Q05655 Protein kinase C delta 84.38% 97.79%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.31% 97.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.30% 86.33%
CHEMBL206 P03372 Estrogen receptor alpha 82.61% 97.64%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.56% 96.21%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.98% 92.62%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.81% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.77% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.76% 92.94%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.40% 100.00%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 80.24% 92.88%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Panax notoginseng

Cross-Links

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PubChem 122182597
LOTUS LTS0242523
wikiData Q105380474