(1R,4aR,7aR)-7-(hydroxymethyl)-1-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-[[(1S,2'R,5R,11S,12S,15S)-2'-methoxy-3-methyl-2'-propan-2-ylspiro[3-azatetracyclo[6.5.1.11,5.011,14]pentadec-8(14)-ene-15,5'-oxane]-12-carbonyl]oxymethyl]oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid

Details

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Internal ID 3aeb6636-2d11-4403-9577-5a71b730a50c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name (1R,4aR,7aR)-7-(hydroxymethyl)-1-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-[[(1S,2'R,5R,11S,12S,15S)-2'-methoxy-3-methyl-2'-propan-2-ylspiro[3-azatetracyclo[6.5.1.11,5.011,14]pentadec-8(14)-ene-15,5'-oxane]-12-carbonyl]oxymethyl]oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid
SMILES (Canonical) CC(C)C1(CCC2(CO1)C3CCC4=C5C2(CC(C5CC4)C(=O)OCC6C(C(C(C(O6)OC7C8C(CC=C8CO)C(=CO7)C(=O)O)O)O)O)CN(C3)C)OC
SMILES (Isomeric) CC(C)[C@]1(CC[C@]2(CO1)[C@H]3CCC4=C5[C@]2(C[C@@H]([C@@H]5CC4)C(=O)OC[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)O[C@@H]7[C@@H]8[C@@H](CC=C8CO)C(=CO7)C(=O)O)O)O)O)CN(C3)C)OC
InChI InChI=1S/C40H57NO13/c1-20(2)40(49-4)12-11-38(19-52-40)23-8-5-21-6-10-25-26(13-39(38,30(21)25)18-41(3)14-23)35(48)50-17-28-31(43)32(44)33(45)37(53-28)54-36-29-22(15-42)7-9-24(29)27(16-51-36)34(46)47/h7,16,20,23-26,28-29,31-33,36-37,42-45H,5-6,8-15,17-19H2,1-4H3,(H,46,47)/t23-,24-,25-,26-,28-,29-,31-,32+,33-,36+,37+,38-,39-,40+/m0/s1
InChI Key JAFMBIXBRHZIQZ-RGFXABRPSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C40H57NO13
Molecular Weight 759.90 g/mol
Exact Mass 759.38299087 g/mol
Topological Polar Surface Area (TPSA) 194.00 Ų
XlogP -2.10
Atomic LogP (AlogP) 2.10
H-Bond Acceptor 13
H-Bond Donor 5
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,4aR,7aR)-7-(hydroxymethyl)-1-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-[[(1S,2'R,5R,11S,12S,15S)-2'-methoxy-3-methyl-2'-propan-2-ylspiro[3-azatetracyclo[6.5.1.11,5.011,14]pentadec-8(14)-ene-15,5'-oxane]-12-carbonyl]oxymethyl]oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4709 47.09%
Caco-2 - 0.8718 87.18%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.5980 59.80%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8086 80.86%
OATP1B3 inhibitior + 0.9082 90.82%
MATE1 inhibitior - 0.9420 94.20%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.5994 59.94%
P-glycoprotein inhibitior + 0.7414 74.14%
P-glycoprotein substrate + 0.7182 71.82%
CYP3A4 substrate + 0.7382 73.82%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8580 85.80%
CYP3A4 inhibition - 0.8659 86.59%
CYP2C9 inhibition - 0.8320 83.20%
CYP2C19 inhibition - 0.8811 88.11%
CYP2D6 inhibition - 0.9510 95.10%
CYP1A2 inhibition - 0.8871 88.71%
CYP2C8 inhibition + 0.6986 69.86%
CYP inhibitory promiscuity - 0.9769 97.69%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 0.8800 88.00%
Carcinogenicity (trinary) Danger 0.4551 45.51%
Eye corrosion - 0.9837 98.37%
Eye irritation - 0.9144 91.44%
Skin irritation - 0.7292 72.92%
Skin corrosion - 0.9224 92.24%
Ames mutagenesis - 0.6070 60.70%
Human Ether-a-go-go-Related Gene inhibition - 0.4303 43.03%
Micronuclear + 0.5100 51.00%
Hepatotoxicity - 0.6248 62.48%
skin sensitisation - 0.8535 85.35%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity + 0.5715 57.15%
Acute Oral Toxicity (c) III 0.6167 61.67%
Estrogen receptor binding + 0.8487 84.87%
Androgen receptor binding + 0.7463 74.63%
Thyroid receptor binding - 0.5738 57.38%
Glucocorticoid receptor binding + 0.6808 68.08%
Aromatase binding + 0.6708 67.08%
PPAR gamma + 0.7426 74.26%
Honey bee toxicity - 0.6809 68.09%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8710 87.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.44% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.32% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.48% 91.11%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 96.82% 94.62%
CHEMBL2581 P07339 Cathepsin D 95.61% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.10% 97.09%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 91.93% 94.08%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.15% 96.61%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.54% 95.56%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 89.33% 96.47%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.42% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.13% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.09% 89.00%
CHEMBL5028 O14672 ADAM10 86.41% 97.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.04% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.52% 99.23%
CHEMBL5255 O00206 Toll-like receptor 4 85.50% 92.50%
CHEMBL340 P08684 Cytochrome P450 3A4 85.27% 91.19%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.14% 93.56%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 83.18% 95.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.92% 100.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.92% 93.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.57% 97.14%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 80.31% 98.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphniphyllum calycinum

Cross-Links

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PubChem 163048457
LOTUS LTS0174660
wikiData Q105123733