2-hydroxy-1,5,6-trimethoxy-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxyxanthen-9-one

Details

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Internal ID 6f3a478a-b586-4372-bd07-bb891e375115
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 2-hydroxy-1,5,6-trimethoxy-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxyxanthen-9-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H32O16/c1-36-13-6-12(16-19(32)15-11(41-25(16)24(13)38-3)5-4-9(28)23(15)37-2)42-27-22(35)20(33)18(31)14(43-27)8-40-26-21(34)17(30)10(29)7-39-26/h4-6,10,14,17-18,20-22,26-31,33-35H,7-8H2,1-3H3/t10-,14-,17+,18-,20+,21-,22-,26+,27-/m1/s1
InChI Key NCWXFEPNWDKNAA-OFRYIYKOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C27H32O16
Molecular Weight 612.50 g/mol
Exact Mass 612.16903493 g/mol
Topological Polar Surface Area (TPSA) 233.00 Ų
XlogP -1.70
Atomic LogP (AlogP) -1.68
H-Bond Acceptor 16
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-hydroxy-1,5,6-trimethoxy-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5187 51.87%
Caco-2 - 0.8770 87.70%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.5499 54.99%
OATP2B1 inhibitior - 0.8578 85.78%
OATP1B1 inhibitior + 0.8974 89.74%
OATP1B3 inhibitior + 0.9399 93.99%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.5810 58.10%
P-glycoprotein inhibitior - 0.5216 52.16%
P-glycoprotein substrate - 0.5955 59.55%
CYP3A4 substrate + 0.6362 63.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8277 82.77%
CYP3A4 inhibition - 0.9524 95.24%
CYP2C9 inhibition - 0.9638 96.38%
CYP2C19 inhibition - 0.9380 93.80%
CYP2D6 inhibition - 0.9114 91.14%
CYP1A2 inhibition - 0.8567 85.67%
CYP2C8 inhibition + 0.5493 54.93%
CYP inhibitory promiscuity - 0.9232 92.32%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6946 69.46%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9263 92.63%
Skin irritation - 0.8471 84.71%
Skin corrosion - 0.9654 96.54%
Ames mutagenesis + 0.7336 73.36%
Human Ether-a-go-go-Related Gene inhibition + 0.6646 66.46%
Micronuclear + 0.5474 54.74%
Hepatotoxicity - 0.6587 65.87%
skin sensitisation - 0.9045 90.45%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.9642 96.42%
Acute Oral Toxicity (c) III 0.7104 71.04%
Estrogen receptor binding + 0.8120 81.20%
Androgen receptor binding + 0.5222 52.22%
Thyroid receptor binding + 0.5297 52.97%
Glucocorticoid receptor binding + 0.6139 61.39%
Aromatase binding + 0.6568 65.68%
PPAR gamma + 0.7073 70.73%
Honey bee toxicity - 0.7939 79.39%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.8158 81.58%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.73% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.26% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.98% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.33% 95.56%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 93.06% 89.62%
CHEMBL2581 P07339 Cathepsin D 92.64% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.44% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.91% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.58% 86.33%
CHEMBL2535 P11166 Glucose transporter 86.80% 98.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.81% 99.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.44% 97.09%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 85.21% 80.78%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.93% 99.23%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.53% 95.83%
CHEMBL4208 P20618 Proteasome component C5 83.60% 90.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.29% 99.15%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.28% 95.89%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.26% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Swertia kouitchensis

Cross-Links

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PubChem 71747857
LOTUS LTS0099117
wikiData Q105177428