[(1S)-1-[(3S,8S,9R,10R,12R,13R,14R,17S)-3-[(2R,4S,5R,6R)-5-[(2S,4S,5R,6R)-5-[(2S,3R,4R,5R,6R)-3,5-dihydroxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-8,14,17-trihydroxy-10,13-dimethyl-12-[(E)-2-methylbut-2-enoyl]oxy-1,2,3,4,7,9,11,12,15,16-decahydrocyclopenta[a]phenanthren-17-yl]ethyl] benzoate

Details

Top
Internal ID 0dd58297-e9e8-4db7-b794-cb06fbf296ce
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(1S)-1-[(3S,8S,9R,10R,12R,13R,14R,17S)-3-[(2R,4S,5R,6R)-5-[(2S,4S,5R,6R)-5-[(2S,3R,4R,5R,6R)-3,5-dihydroxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-8,14,17-trihydroxy-10,13-dimethyl-12-[(E)-2-methylbut-2-enoyl]oxy-1,2,3,4,7,9,11,12,15,16-decahydrocyclopenta[a]phenanthren-17-yl]ethyl] benzoate
SMILES (Canonical) CC=C(C)C(=O)OC1CC2C3(CCC(CC3=CCC2(C4(C1(C(CC4)(C(C)OC(=O)C5=CC=CC=C5)O)C)O)O)OC6CC(C(C(O6)C)OC7CC(C(C(O7)C)OC8C(C(C(C(O8)C)O)OC)O)OC)OC)C
SMILES (Isomeric) C/C=C(\C)/C(=O)O[C@@H]1C[C@@H]2[C@]3(CC[C@@H](CC3=CC[C@]2([C@@]4([C@]1([C@@](CC4)([C@H](C)OC(=O)C5=CC=CC=C5)O)C)O)O)O[C@H]6C[C@@H]([C@@H]([C@H](O6)C)O[C@H]7C[C@@H]([C@@H]([C@H](O7)C)O[C@H]8[C@@H]([C@@H]([C@@H]([C@H](O8)C)O)OC)O)OC)OC)C
InChI InChI=1S/C54H80O18/c1-12-28(2)47(57)70-39-27-38-50(7)20-19-35(24-34(50)18-21-53(38,60)54(61)23-22-52(59,51(39,54)8)32(6)68-48(58)33-16-14-13-15-17-33)69-40-25-36(62-9)44(30(4)65-40)71-41-26-37(63-10)45(31(5)66-41)72-49-43(56)46(64-11)42(55)29(3)67-49/h12-18,29-32,35-46,49,55-56,59-61H,19-27H2,1-11H3/b28-12+/t29-,30-,31-,32+,35+,36+,37+,38-,39-,40+,41+,42-,43-,44-,45-,46-,49+,50+,51-,52-,53+,54-/m1/s1
InChI Key VNPWBOBXORHSDJ-TWPMGTLBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C54H80O18
Molecular Weight 1017.20 g/mol
Exact Mass 1016.53446570 g/mol
Topological Polar Surface Area (TPSA) 237.00 Ų
XlogP 3.90
Atomic LogP (AlogP) 4.58
H-Bond Acceptor 18
H-Bond Donor 5
Rotatable Bonds 14

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(1S)-1-[(3S,8S,9R,10R,12R,13R,14R,17S)-3-[(2R,4S,5R,6R)-5-[(2S,4S,5R,6R)-5-[(2S,3R,4R,5R,6R)-3,5-dihydroxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-8,14,17-trihydroxy-10,13-dimethyl-12-[(E)-2-methylbut-2-enoyl]oxy-1,2,3,4,7,9,11,12,15,16-decahydrocyclopenta[a]phenanthren-17-yl]ethyl] benzoate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9136 91.36%
Caco-2 - 0.8644 86.44%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7085 70.85%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8374 83.74%
OATP1B3 inhibitior + 0.9122 91.22%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7874 78.74%
BSEP inhibitior + 0.9948 99.48%
P-glycoprotein inhibitior + 0.7494 74.94%
P-glycoprotein substrate + 0.7737 77.37%
CYP3A4 substrate + 0.7409 74.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8800 88.00%
CYP3A4 inhibition - 0.7482 74.82%
CYP2C9 inhibition - 0.8927 89.27%
CYP2C19 inhibition - 0.9044 90.44%
CYP2D6 inhibition - 0.9288 92.88%
CYP1A2 inhibition - 0.8304 83.04%
CYP2C8 inhibition + 0.7682 76.82%
CYP inhibitory promiscuity - 0.9574 95.74%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5356 53.56%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9008 90.08%
Skin irritation - 0.5164 51.64%
Skin corrosion - 0.9256 92.56%
Ames mutagenesis - 0.5670 56.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7904 79.04%
Micronuclear - 0.6600 66.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation - 0.8713 87.13%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.8879 88.79%
Acute Oral Toxicity (c) II 0.4595 45.95%
Estrogen receptor binding + 0.7886 78.86%
Androgen receptor binding + 0.7576 75.76%
Thyroid receptor binding + 0.6579 65.79%
Glucocorticoid receptor binding + 0.7977 79.77%
Aromatase binding + 0.6456 64.56%
PPAR gamma + 0.8262 82.62%
Honey bee toxicity - 0.6077 60.77%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5745 57.45%
Fish aquatic toxicity + 0.9830 98.30%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.03% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.91% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.85% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.48% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.67% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.12% 95.56%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 92.82% 83.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.36% 99.23%
CHEMBL226 P30542 Adenosine A1 receptor 90.33% 95.93%
CHEMBL221 P23219 Cyclooxygenase-1 89.81% 90.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.77% 95.89%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 89.36% 91.07%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 88.89% 97.14%
CHEMBL5028 O14672 ADAM10 88.32% 97.50%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 88.04% 94.08%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 87.85% 100.00%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 86.83% 94.62%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.70% 96.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.68% 100.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 85.45% 95.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.67% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.12% 100.00%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 84.11% 94.23%
CHEMBL340 P08684 Cytochrome P450 3A4 82.78% 91.19%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.86% 93.56%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 81.70% 95.17%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.29% 93.00%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 80.10% 95.71%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Orbea variegata

Cross-Links

Top
PubChem 101923687
LOTUS LTS0199809
wikiData Q105289838