3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxolan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)chromen-4-one

Details

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Internal ID 0987cbe1-cd7f-4dda-ae04-9e6c8289d61f
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxolan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)chromen-4-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H32O16/c1-9-18(31)22(35)24(37)27(41-9)40-8-16-20(33)23(36)28(43-16)44-26-21(34)17-12(30)6-11(29)7-13(17)42-25(26)10-4-14(38-2)19(32)15(5-10)39-3/h4-7,9,16,18,20,22-24,27-33,35-37H,8H2,1-3H3/t9-,16-,18-,20-,22+,23+,24+,27+,28-/m0/s1
InChI Key DUDOAFBUHCTQHF-GILAHISDSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C28H32O16
Molecular Weight 624.50 g/mol
Exact Mass 624.16903493 g/mol
Topological Polar Surface Area (TPSA) 244.00 Ų
XlogP -0.40
Atomic LogP (AlogP) -0.74
H-Bond Acceptor 16
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxolan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)chromen-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6626 66.26%
Caco-2 - 0.9020 90.20%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7402 74.02%
OATP2B1 inhibitior - 0.7188 71.88%
OATP1B1 inhibitior + 0.8476 84.76%
OATP1B3 inhibitior + 0.9134 91.34%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.5675 56.75%
P-glycoprotein inhibitior - 0.5000 50.00%
P-glycoprotein substrate + 0.6569 65.69%
CYP3A4 substrate + 0.6392 63.92%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8527 85.27%
CYP3A4 inhibition - 0.8267 82.67%
CYP2C9 inhibition - 0.8099 80.99%
CYP2C19 inhibition - 0.7969 79.69%
CYP2D6 inhibition - 0.9064 90.64%
CYP1A2 inhibition - 0.8830 88.30%
CYP2C8 inhibition + 0.8073 80.73%
CYP inhibitory promiscuity + 0.5296 52.96%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5847 58.47%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9030 90.30%
Skin irritation - 0.8356 83.56%
Skin corrosion - 0.9587 95.87%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4335 43.35%
Micronuclear + 0.7492 74.92%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.9134 91.34%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.9035 90.35%
Acute Oral Toxicity (c) III 0.7031 70.31%
Estrogen receptor binding + 0.8433 84.33%
Androgen receptor binding + 0.5604 56.04%
Thyroid receptor binding + 0.5623 56.23%
Glucocorticoid receptor binding + 0.6763 67.63%
Aromatase binding + 0.5951 59.51%
PPAR gamma + 0.7314 73.14%
Honey bee toxicity - 0.7662 76.62%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5549 55.49%
Fish aquatic toxicity + 0.8887 88.87%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.44% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.65% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.40% 94.00%
CHEMBL2581 P07339 Cathepsin D 96.05% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.16% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.94% 86.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.27% 85.14%
CHEMBL3401 O75469 Pregnane X receptor 91.40% 94.73%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 91.11% 95.64%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.02% 99.17%
CHEMBL3714130 P46095 G-protein coupled receptor 6 90.58% 97.36%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.10% 95.56%
CHEMBL3194 P02766 Transthyretin 86.44% 90.71%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.47% 96.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.84% 95.89%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 82.78% 94.03%
CHEMBL4208 P20618 Proteasome component C5 82.28% 90.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 81.98% 99.15%
CHEMBL1951 P21397 Monoamine oxidase A 81.62% 91.49%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.10% 92.94%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 80.04% 94.42%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lysimachia congestiflora

Cross-Links

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PubChem 102438663
LOTUS LTS0057685
wikiData Q104989177