[hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] hydrogen phosphate

Details

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Internal ID f7215caa-f825-4b2c-8124-05b6d0fa41ab
Taxonomy Nucleosides, nucleotides, and analogues > Pyrimidine nucleotides > Pyrimidine nucleotide sugars
IUPAC Name [hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] hydrogen phosphate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C16H26N2O16P2/c1-6-3-18(16(25)17-14(6)24)10-2-7(20)9(31-10)5-30-35(26,27)34-36(28,29)33-15-13(23)12(22)11(21)8(4-19)32-15/h3,7-13,15,19-23H,2,4-5H2,1H3,(H,26,27)(H,28,29)(H,17,24,25)/t7-,8+,9+,10+,11+,12-,13+,15-/m0/s1
InChI Key YSYKRGRSMLTJNL-JSDFYWKGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C16H26N2O16P2
Molecular Weight 564.30 g/mol
Exact Mass 564.07575674 g/mol
Topological Polar Surface Area (TPSA) 271.00 Ų
XlogP -5.50
Atomic LogP (AlogP) -3.46
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] hydrogen phosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7283 72.83%
Caco-2 - 0.8897 88.97%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.4541 45.41%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9073 90.73%
OATP1B3 inhibitior + 0.9385 93.85%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.7216 72.16%
P-glycoprotein inhibitior - 0.5053 50.53%
P-glycoprotein substrate - 0.8051 80.51%
CYP3A4 substrate + 0.6407 64.07%
CYP2C9 substrate - 0.7935 79.35%
CYP2D6 substrate - 0.8654 86.54%
CYP3A4 inhibition + 0.6489 64.89%
CYP2C9 inhibition - 0.8345 83.45%
CYP2C19 inhibition - 0.8101 81.01%
CYP2D6 inhibition - 0.8693 86.93%
CYP1A2 inhibition - 0.8581 85.81%
CYP2C8 inhibition - 0.6703 67.03%
CYP inhibitory promiscuity - 0.7978 79.78%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8100 81.00%
Carcinogenicity (trinary) Non-required 0.4918 49.18%
Eye corrosion - 0.9835 98.35%
Eye irritation - 0.9474 94.74%
Skin irritation - 0.7980 79.80%
Skin corrosion - 0.9356 93.56%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6643 66.43%
Micronuclear + 0.9800 98.00%
Hepatotoxicity - 0.5084 50.84%
skin sensitisation - 0.8723 87.23%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity + 0.4906 49.06%
Acute Oral Toxicity (c) III 0.5164 51.64%
Estrogen receptor binding + 0.7075 70.75%
Androgen receptor binding + 0.7694 76.94%
Thyroid receptor binding + 0.5192 51.92%
Glucocorticoid receptor binding + 0.5655 56.55%
Aromatase binding + 0.6145 61.45%
PPAR gamma + 0.6527 65.27%
Honey bee toxicity - 0.7205 72.05%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.8035 80.35%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.49% 96.09%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 95.67% 86.92%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.84% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.62% 85.14%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 92.05% 80.33%
CHEMBL3401 O75469 Pregnane X receptor 91.47% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.62% 95.56%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 90.37% 93.04%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.02% 96.61%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.68% 89.00%
CHEMBL5255 O00206 Toll-like receptor 4 86.46% 92.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.07% 94.45%
CHEMBL2581 P07339 Cathepsin D 85.96% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.82% 99.23%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 84.67% 94.01%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.19% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.87% 94.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.59% 94.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 83.36% 91.11%
CHEMBL220 P22303 Acetylcholinesterase 82.12% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.85% 95.89%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.61% 96.21%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 80.38% 91.71%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.07% 97.36%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana

Cross-Links

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PubChem 11169012
LOTUS LTS0219958
wikiData Q105361170