(3R)-3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-tris(carboxymethyl)-30-[[(2S)-1,3-dihydroxy-2-(1-hydroxybutylideneamino)propylidene]amino]-9-[(1S)-1,2-dihydroxy-2-iminoethyl]-5,8,11,14,17,20,23,26,29-nonahydroxy-18-(4-hydroxyphenyl)-27-(1H-indol-3-ylmethyl)-3-(1H-indol-3-ylmethylidene)-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]butanoic acid

Details

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Internal ID 3eb91c55-1c91-4596-86ce-9dda4e06eafd
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name (3R)-3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-tris(carboxymethyl)-30-[[(2S)-1,3-dihydroxy-2-(1-hydroxybutylideneamino)propylidene]amino]-9-[(1S)-1,2-dihydroxy-2-iminoethyl]-5,8,11,14,17,20,23,26,29-nonahydroxy-18-(4-hydroxyphenyl)-27-(1H-indol-3-ylmethyl)-3-(1H-indol-3-ylmethylidene)-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]butanoic acid
SMILES (Canonical) CCCC(=NC(CO)C(=NC1C(OC(=O)C(=CC2=CNC3=CC=CC=C32)N=C(C(N=C(C(N=C(CN=C(C(N=C(C(N=C(C(N=C(C(N=C(C(N=C1O)CC4=CNC5=CC=CC=C54)O)CC(=O)O)O)CC(=O)O)O)C6=CC=C(C=C6)O)O)CC(=O)O)O)O)C(C(=N)O)O)O)C(C)CC(=O)O)O)C)O)O
SMILES (Isomeric) CCCC(=N[C@@H](CO)C(=N[C@H]1[C@H](OC(=O)/C(=C/C2=CNC3=CC=CC=C32)/N=C([C@@H](N=C([C@H](N=C(CN=C([C@@H](N=C([C@H](N=C([C@@H](N=C([C@@H](N=C([C@H](N=C1O)CC4=CNC5=CC=CC=C54)O)CC(=O)O)O)CC(=O)O)O)C6=CC=C(C=C6)O)O)CC(=O)O)O)O)[C@@H](C(=N)O)O)O)[C@H](C)CC(=O)O)O)C)O)O
InChI InChI=1S/C65H76N14O25/c1-4-9-44(82)70-43(27-80)60(98)78-51-29(3)104-65(103)42(20-32-25-68-37-13-8-6-11-35(32)37)75-61(99)50(28(2)18-46(84)85)77-64(102)53(54(92)55(66)93)76-45(83)26-69-56(94)39(21-47(86)87)74-63(101)52(30-14-16-33(81)17-15-30)79-59(97)41(23-49(90)91)72-58(96)40(22-48(88)89)71-57(95)38(73-62(51)100)19-31-24-67-36-12-7-5-10-34(31)36/h5-8,10-17,20,24-25,28-29,38-41,43,50-54,67-68,80-81,92H,4,9,18-19,21-23,26-27H2,1-3H3,(H2,66,93)(H,69,94)(H,70,82)(H,71,95)(H,72,96)(H,73,100)(H,74,101)(H,75,99)(H,76,83)(H,77,102)(H,78,98)(H,79,97)(H,84,85)(H,86,87)(H,88,89)(H,90,91)/b42-20-/t28-,29-,38-,39+,40+,41+,43+,50+,51+,52-,53-,54+/m1/s1
InChI Key CVOAOKXASHELBI-BZUDXOATSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C65H76N14O25
Molecular Weight 1453.40 g/mol
Exact Mass 1452.51060397 g/mol
Topological Polar Surface Area (TPSA) 670.00 Ų
XlogP 1.60
Atomic LogP (AlogP) 5.32
H-Bond Acceptor 21
H-Bond Donor 22
Rotatable Bonds 21

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3R)-3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-tris(carboxymethyl)-30-[[(2S)-1,3-dihydroxy-2-(1-hydroxybutylideneamino)propylidene]amino]-9-[(1S)-1,2-dihydroxy-2-iminoethyl]-5,8,11,14,17,20,23,26,29-nonahydroxy-18-(4-hydroxyphenyl)-27-(1H-indol-3-ylmethyl)-3-(1H-indol-3-ylmethylidene)-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]butanoic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8763 87.63%
Caco-2 - 0.8568 85.68%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.4261 42.61%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8019 80.19%
OATP1B3 inhibitior + 0.9293 92.93%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7311 73.11%
BSEP inhibitior + 0.9720 97.20%
P-glycoprotein inhibitior + 0.7423 74.23%
P-glycoprotein substrate + 0.8235 82.35%
CYP3A4 substrate + 0.7470 74.70%
CYP2C9 substrate - 0.5974 59.74%
CYP2D6 substrate - 0.8666 86.66%
CYP3A4 inhibition - 0.6309 63.09%
CYP2C9 inhibition - 0.8075 80.75%
CYP2C19 inhibition - 0.7830 78.30%
CYP2D6 inhibition - 0.8773 87.73%
CYP1A2 inhibition - 0.8224 82.24%
CYP2C8 inhibition + 0.8307 83.07%
CYP inhibitory promiscuity - 0.6889 68.89%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.5830 58.30%
Eye corrosion - 0.9837 98.37%
Eye irritation - 0.8963 89.63%
Skin irritation - 0.7637 76.37%
Skin corrosion - 0.9249 92.49%
Ames mutagenesis - 0.6537 65.37%
Human Ether-a-go-go-Related Gene inhibition + 0.7383 73.83%
Micronuclear + 0.7500 75.00%
Hepatotoxicity - 0.7042 70.42%
skin sensitisation - 0.8406 84.06%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.7546 75.46%
Acute Oral Toxicity (c) III 0.5926 59.26%
Estrogen receptor binding + 0.6110 61.10%
Androgen receptor binding + 0.7763 77.63%
Thyroid receptor binding + 0.7594 75.94%
Glucocorticoid receptor binding + 0.7999 79.99%
Aromatase binding + 0.7188 71.88%
PPAR gamma + 0.8049 80.49%
Honey bee toxicity - 0.6238 62.38%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity + 0.9066 90.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 99.69% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.41% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.66% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.95% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.05% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.56% 94.45%
CHEMBL5103 Q969S8 Histone deacetylase 10 95.54% 90.08%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 95.50% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.85% 97.09%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 92.27% 91.71%
CHEMBL3310 Q96DB2 Histone deacetylase 11 91.95% 88.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.51% 89.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 90.13% 93.10%
CHEMBL3401 O75469 Pregnane X receptor 89.45% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.93% 99.17%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 88.71% 94.62%
CHEMBL1951 P21397 Monoamine oxidase A 85.93% 91.49%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 85.47% 97.64%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 84.49% 96.21%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.75% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.68% 92.62%
CHEMBL4105838 Q96GG9 DCN1-like protein 1 81.51% 95.00%
CHEMBL2000 P03952 Plasma kallikrein 81.27% 93.92%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 80.33% 95.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.17% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 163187490
LOTUS LTS0145259
wikiData Q104970905