(2S,3R,4R,5S,6R)-2-[(2S,3R,4R,5R,6S)-2-[[(2R,3R,5R,8R,9R,10S,12R,13R,14S,17S)-2,12-dihydroxy-4,4,8,10,14-pentamethyl-17-[(2R)-6-methyl-2-[(2S,3S,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID c002add5-5baf-4dd6-9c6c-5e2300da6b3e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (2S,3R,4R,5S,6R)-2-[(2S,3R,4R,5R,6S)-2-[[(2R,3R,5R,8R,9R,10S,12R,13R,14S,17S)-2,12-dihydroxy-4,4,8,10,14-pentamethyl-17-[(2R)-6-methyl-2-[(2S,3S,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(C)(C1CCC2(C1C(CC3C2(CCC4C3(CC(C(C4(C)C)OC5C(C(C(C(O5)CO)O)O)OC6C(C(C(C(O6)CO)O)O)O)O)C)C)O)C)OC7C(C(C(C(O7)CO)O)O)O)C
SMILES (Isomeric) CC(=CCC[C@](C)([C@H]1CC[C@]2([C@@H]1[C@@H](C[C@H]3[C@]2(CC[C@@H]4[C@]3(C[C@H]([C@@H](C4(C)C)O[C@@H]5[C@@H]([C@@H]([C@H]([C@@H](O5)CO)O)O)O[C@H]6[C@@H]([C@@H]([C@@H]([C@H](O6)CO)O)O)O)O)C)C)O)C)O[C@H]7[C@H]([C@@H]([C@@H]([C@H](O7)CO)O)O)O)C
InChI InChI=1S/C48H82O19/c1-21(2)10-9-13-48(8,67-42-38(61)35(58)32(55)26(19-50)63-42)22-11-14-47(7)30(22)23(52)16-29-45(5)17-24(53)40(44(3,4)28(45)12-15-46(29,47)6)66-43-39(36(59)33(56)27(20-51)64-43)65-41-37(60)34(57)31(54)25(18-49)62-41/h10,22-43,49-61H,9,11-20H2,1-8H3/t22-,23+,24+,25+,26+,27-,28-,29+,30-,31+,32+,33-,34+,35+,36+,37+,38-,39+,40-,41-,42-,43+,45+,46+,47-,48+/m0/s1
InChI Key VENRSYBHHVDBDC-GFHGIRBLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C48H82O19
Molecular Weight 963.20 g/mol
Exact Mass 962.54503038 g/mol
Topological Polar Surface Area (TPSA) 318.00 Ų
XlogP 1.40
Atomic LogP (AlogP) -1.06
H-Bond Acceptor 19
H-Bond Donor 13
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5S,6R)-2-[(2S,3R,4R,5R,6S)-2-[[(2R,3R,5R,8R,9R,10S,12R,13R,14S,17S)-2,12-dihydroxy-4,4,8,10,14-pentamethyl-17-[(2R)-6-methyl-2-[(2S,3S,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6877 68.77%
Caco-2 - 0.9052 90.52%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7251 72.51%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8302 83.02%
OATP1B3 inhibitior + 0.8189 81.89%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.7551 75.51%
P-glycoprotein inhibitior + 0.7589 75.89%
P-glycoprotein substrate - 0.6888 68.88%
CYP3A4 substrate + 0.7153 71.53%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.9502 95.02%
CYP2C9 inhibition - 0.8671 86.71%
CYP2C19 inhibition - 0.9036 90.36%
CYP2D6 inhibition - 0.9380 93.80%
CYP1A2 inhibition - 0.9057 90.57%
CYP2C8 inhibition + 0.6372 63.72%
CYP inhibitory promiscuity - 0.9413 94.13%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6474 64.74%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9040 90.40%
Skin irritation - 0.5956 59.56%
Skin corrosion - 0.9488 94.88%
Ames mutagenesis - 0.7554 75.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8313 83.13%
Micronuclear - 0.8800 88.00%
Hepatotoxicity + 0.6806 68.06%
skin sensitisation - 0.8991 89.91%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity + 0.5607 56.07%
Acute Oral Toxicity (c) I 0.5677 56.77%
Estrogen receptor binding + 0.7904 79.04%
Androgen receptor binding + 0.7543 75.43%
Thyroid receptor binding - 0.5207 52.07%
Glucocorticoid receptor binding + 0.6998 69.98%
Aromatase binding + 0.6520 65.20%
PPAR gamma + 0.7830 78.30%
Honey bee toxicity - 0.5298 52.98%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9172 91.72%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.85% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.81% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.80% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.53% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.27% 95.89%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.49% 96.61%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.23% 97.36%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.84% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 90.46% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.43% 94.45%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.04% 92.94%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.00% 86.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.11% 91.24%
CHEMBL226 P30542 Adenosine A1 receptor 87.86% 95.93%
CHEMBL1951 P21397 Monoamine oxidase A 85.85% 91.49%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.79% 97.14%
CHEMBL2996 Q05655 Protein kinase C delta 84.10% 97.79%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 83.72% 91.03%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.64% 95.83%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 81.65% 95.58%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.24% 100.00%
CHEMBL259 P32245 Melanocortin receptor 4 80.67% 95.38%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.60% 91.07%
CHEMBL2581 P07339 Cathepsin D 80.52% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gynostemma pentaphyllum

Cross-Links

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PubChem 125181830
LOTUS LTS0159268
wikiData Q105284729