[(2S,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[7-hydroxy-3-[(2S,3R,4S,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromenylium-5-yl]oxyoxan-2-yl]methyl acetate

Details

Top
Internal ID aef53538-565b-450c-bcb4-2b09b3f14cdd
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-5-O-glycosides
IUPAC Name [(2S,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[7-hydroxy-3-[(2S,3R,4S,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromenylium-5-yl]oxyoxan-2-yl]methyl acetate
SMILES (Canonical) CC(=O)OCC1C(C(C(C(O1)OC2=CC(=CC3=[O+]C(=C(C=C23)OC4C(C(C(C(O4)CO)O)O)O)C5=CC(=C(C(=C5)O)O)O)O)O)O)O
SMILES (Isomeric) CC(=O)OC[C@H]1[C@H]([C@@H]([C@H]([C@@H](O1)OC2=CC(=CC3=[O+]C(=C(C=C23)O[C@H]4[C@@H]([C@H]([C@@H]([C@@H](O4)CO)O)O)O)C5=CC(=C(C(=C5)O)O)O)O)O)O)O
InChI InChI=1S/C29H32O18/c1-9(31)42-8-19-22(37)24(39)26(41)28(47-19)44-16-5-11(32)4-15-12(16)6-17(27(43-15)10-2-13(33)20(35)14(34)3-10)45-29-25(40)23(38)21(36)18(7-30)46-29/h2-6,18-19,21-26,28-30,36-41H,7-8H2,1H3,(H3-,32,33,34,35)/p+1/t18-,19-,21+,22+,23-,24-,25+,26+,28+,29+/m0/s1
InChI Key RKQATBHJDHXYOM-YYWPPVAESA-O
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C29H33O18+
Molecular Weight 669.60 g/mol
Exact Mass 669.16668920 g/mol
Topological Polar Surface Area (TPSA) 287.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -1.87
H-Bond Acceptor 17
H-Bond Donor 11
Rotatable Bonds 8

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(2S,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[7-hydroxy-3-[(2S,3R,4S,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromenylium-5-yl]oxyoxan-2-yl]methyl acetate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6699 66.99%
Caco-2 - 0.9036 90.36%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.5312 53.12%
OATP2B1 inhibitior - 0.5733 57.33%
OATP1B1 inhibitior + 0.8411 84.11%
OATP1B3 inhibitior + 0.9536 95.36%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6507 65.07%
P-glycoprotein inhibitior - 0.4295 42.95%
P-glycoprotein substrate - 0.7367 73.67%
CYP3A4 substrate + 0.6264 62.64%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8629 86.29%
CYP3A4 inhibition - 0.9749 97.49%
CYP2C9 inhibition - 0.9314 93.14%
CYP2C19 inhibition - 0.9013 90.13%
CYP2D6 inhibition - 0.9457 94.57%
CYP1A2 inhibition - 0.8641 86.41%
CYP2C8 inhibition + 0.7389 73.89%
CYP inhibitory promiscuity - 0.7946 79.46%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6921 69.21%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9076 90.76%
Skin irritation - 0.8141 81.41%
Skin corrosion - 0.9560 95.60%
Ames mutagenesis - 0.5491 54.91%
Human Ether-a-go-go-Related Gene inhibition + 0.8330 83.30%
Micronuclear + 0.5133 51.33%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.9225 92.25%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7380 73.80%
Acute Oral Toxicity (c) III 0.5760 57.60%
Estrogen receptor binding + 0.7799 77.99%
Androgen receptor binding + 0.5912 59.12%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.5582 55.82%
Aromatase binding + 0.5710 57.10%
PPAR gamma + 0.6347 63.47%
Honey bee toxicity - 0.8025 80.25%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6249 62.49%
Fish aquatic toxicity + 0.8871 88.71%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.36% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.74% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.07% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.32% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 91.84% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.73% 99.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.90% 85.14%
CHEMBL1951 P21397 Monoamine oxidase A 90.88% 91.49%
CHEMBL2581 P07339 Cathepsin D 90.25% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.23% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.37% 99.15%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.68% 96.00%
CHEMBL3194 P02766 Transthyretin 81.14% 90.71%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.13% 96.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.05% 97.36%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.00% 94.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.93% 92.62%
CHEMBL5255 O00206 Toll-like receptor 4 80.34% 92.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Pelargonium dolomiticum

Cross-Links

Top
PubChem 163191202
LOTUS LTS0014277
wikiData Q105238696