(2S,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6S)-6-[(2R,3R,4S,5S,6R)-2-[[(3S,4R,4aR,6aR,6bS,8aS,14aR,14bS)-4,8a-bis(hydroxymethyl)-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,14a-dodecahydropicen-3-yl]oxy]-5-hydroxy-6-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID da7a8d4a-c468-4ed7-b22a-26ac98a51383
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6S)-6-[(2R,3R,4S,5S,6R)-2-[[(3S,4R,4aR,6aR,6bS,8aS,14aR,14bS)-4,8a-bis(hydroxymethyl)-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,14a-dodecahydropicen-3-yl]oxy]-5-hydroxy-6-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2(C)CO)CCC4(C3C=CC5=C6CC(CCC6(CCC54C)CO)(C)C)C)C)OC7C(C(C(C(O7)CO)O)O)O)OC8C(C(C(C(O8)CO)OC9C(C(C(C(O9)CO)O)O)O)O)O)O
SMILES (Isomeric) C[C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@H]2CC[C@]3([C@H]([C@]2(C)CO)CC[C@@]4([C@@H]3C=CC5=C6CC(CC[C@@]6(CC[C@]54C)CO)(C)C)C)C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O)O)O
InChI InChI=1S/C54H88O22/c1-24-33(60)43(75-47-41(68)38(65)42(29(21-57)72-47)74-45-39(66)36(63)34(61)27(19-55)70-45)44(76-46-40(67)37(64)35(62)28(20-56)71-46)48(69-24)73-32-11-12-50(4)30(51(32,5)22-58)10-13-53(7)31(50)9-8-25-26-18-49(2,3)14-16-54(26,23-59)17-15-52(25,53)6/h8-9,24,27-48,55-68H,10-23H2,1-7H3/t24-,27-,28-,29-,30-,31-,32+,33+,34-,35-,36+,37+,38-,39-,40-,41-,42-,43+,44-,45+,46+,47+,48+,50+,51+,52-,53-,54-/m1/s1
InChI Key CNBUEKQQBLCIHJ-URADCOCDSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C54H88O22
Molecular Weight 1089.30 g/mol
Exact Mass 1088.57672443 g/mol
Topological Polar Surface Area (TPSA) 357.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -1.64
H-Bond Acceptor 22
H-Bond Donor 14
Rotatable Bonds 13

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6S)-6-[(2R,3R,4S,5S,6R)-2-[[(3S,4R,4aR,6aR,6bS,8aS,14aR,14bS)-4,8a-bis(hydroxymethyl)-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,14a-dodecahydropicen-3-yl]oxy]-5-hydroxy-6-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6624 66.24%
Caco-2 - 0.8818 88.18%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.8215 82.15%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8558 85.58%
OATP1B3 inhibitior - 0.4699 46.99%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.8510 85.10%
P-glycoprotein inhibitior + 0.7450 74.50%
P-glycoprotein substrate + 0.5080 50.80%
CYP3A4 substrate + 0.7225 72.25%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8401 84.01%
CYP3A4 inhibition - 0.9574 95.74%
CYP2C9 inhibition - 0.8723 87.23%
CYP2C19 inhibition - 0.8879 88.79%
CYP2D6 inhibition - 0.9407 94.07%
CYP1A2 inhibition - 0.8680 86.80%
CYP2C8 inhibition + 0.6787 67.87%
CYP inhibitory promiscuity - 0.9298 92.98%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6302 63.02%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9020 90.20%
Skin irritation - 0.6831 68.31%
Skin corrosion - 0.9498 94.98%
Ames mutagenesis - 0.7608 76.08%
Human Ether-a-go-go-Related Gene inhibition + 0.7534 75.34%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.5177 51.77%
skin sensitisation - 0.8935 89.35%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.8125 81.25%
Nephrotoxicity - 0.7433 74.33%
Acute Oral Toxicity (c) III 0.7395 73.95%
Estrogen receptor binding + 0.7947 79.47%
Androgen receptor binding + 0.7472 74.72%
Thyroid receptor binding + 0.5333 53.33%
Glucocorticoid receptor binding + 0.6906 69.06%
Aromatase binding + 0.6302 63.02%
PPAR gamma + 0.7864 78.64%
Honey bee toxicity - 0.6831 68.31%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9438 94.38%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.60% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.35% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 95.17% 97.36%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.03% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.80% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.60% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.93% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.84% 92.94%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.31% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.20% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.11% 95.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.85% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 83.00% 94.75%
CHEMBL2581 P07339 Cathepsin D 82.76% 98.95%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.38% 93.04%
CHEMBL226 P30542 Adenosine A1 receptor 81.15% 95.93%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 80.96% 92.78%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.88% 91.07%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Verbascum songaricum

Cross-Links

Top
PubChem 101681777
LOTUS LTS0165291
wikiData Q104965587