Echinosophoroside B

Details

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Internal ID d0f03aaf-832d-4149-a1ac-1de61ccbecd1
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8aR,9S,10R,11R,12aS,14aR,14bR)-10-hydroxy-11-(hydroxymethyl)-4,4,6a,6b,8a,11,14b-heptamethyl-9-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(COC2OC3C(C(C(OC3OC4CCC5(C(C4(C)C)CCC6(C5CC=C7C6(CCC8(C7CC(C(C8OC9C(C(C(CO9)O)O)O)O)(C)CO)C)C)C)C)C(=O)O)O)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@H](CO[C@H]2O[C@@H]3[C@H]([C@@H]([C@H](O[C@H]3O[C@H]4CC[C@]5([C@H](C4(C)C)CC[C@@]6([C@@H]5CC=C7[C@]6(CC[C@@]8([C@H]7C[C@]([C@H]([C@H]8O[C@H]9[C@@H]([C@H]([C@H](CO9)O)O)O)O)(C)CO)C)C)C)C)C(=O)O)O)O)O)O)O)O)O
InChI InChI=1S/C52H84O22/c1-21-29(56)32(59)36(63)44(69-21)72-38-31(58)25(55)19-68-45(38)73-39-34(61)33(60)37(42(65)66)71-46(39)70-28-12-13-50(6)26(47(28,2)3)11-14-52(8)27(50)10-9-22-23-17-48(4,20-53)40(64)41(49(23,5)15-16-51(22,52)7)74-43-35(62)30(57)24(54)18-67-43/h9,21,23-41,43-46,53-64H,10-20H2,1-8H3,(H,65,66)/t21-,23-,24-,25-,26-,27+,28-,29-,30-,31-,32+,33-,34-,35+,36+,37-,38+,39+,40-,41+,43-,44-,45-,46+,48+,49+,50-,51+,52+/m0/s1
InChI Key RWMVNBVUBWHFEG-DUWBLAIHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C52H84O22
Molecular Weight 1061.20 g/mol
Exact Mass 1060.54542430 g/mol
Topological Polar Surface Area (TPSA) 354.00 Ų
XlogP 0.30
Atomic LogP (AlogP) -1.22
H-Bond Acceptor 21
H-Bond Donor 13
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Echinosophoroside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7891 78.91%
Caco-2 - 0.8973 89.73%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8567 85.67%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7644 76.44%
OATP1B3 inhibitior - 0.5700 57.00%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6276 62.76%
BSEP inhibitior + 0.8892 88.92%
P-glycoprotein inhibitior + 0.7490 74.90%
P-glycoprotein substrate - 0.5359 53.59%
CYP3A4 substrate + 0.7325 73.25%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8798 87.98%
CYP3A4 inhibition - 0.9300 93.00%
CYP2C9 inhibition - 0.8838 88.38%
CYP2C19 inhibition - 0.9101 91.01%
CYP2D6 inhibition - 0.9422 94.22%
CYP1A2 inhibition - 0.8933 89.33%
CYP2C8 inhibition + 0.7868 78.68%
CYP inhibitory promiscuity - 0.9668 96.68%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6254 62.54%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9030 90.30%
Skin irritation - 0.6103 61.03%
Skin corrosion - 0.9480 94.80%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7650 76.50%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.8875 88.75%
skin sensitisation - 0.8917 89.17%
Respiratory toxicity - 0.5778 57.78%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity - 0.7625 76.25%
Nephrotoxicity - 0.9309 93.09%
Acute Oral Toxicity (c) III 0.7945 79.45%
Estrogen receptor binding + 0.8015 80.15%
Androgen receptor binding + 0.7367 73.67%
Thyroid receptor binding + 0.5180 51.80%
Glucocorticoid receptor binding + 0.7553 75.53%
Aromatase binding + 0.6452 64.52%
PPAR gamma + 0.8236 82.36%
Honey bee toxicity - 0.6842 68.42%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9411 94.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.28% 91.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 96.60% 97.36%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.04% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 93.83% 90.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.28% 95.56%
CHEMBL2581 P07339 Cathepsin D 91.14% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.94% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.47% 97.25%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 88.46% 93.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.70% 96.77%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.02% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.67% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.51% 97.09%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.29% 91.07%
CHEMBL5028 O14672 ADAM10 83.20% 97.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.51% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.44% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Sophora koreensis

Cross-Links

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PubChem 11468851
NPASS NPC2009
LOTUS LTS0054603
wikiData Q105246590