5-[(3S,8R,9S,10R,12S,13S,14S,17R)-12,14-dihydroxy-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,6,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]pyran-2-one

Details

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Internal ID 9c878789-5720-49bf-90b5-e23492708fec
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Bufanolides and derivatives
IUPAC Name 5-[(3S,8R,9S,10R,12S,13S,14S,17R)-12,14-dihydroxy-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,6,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]pyran-2-one
SMILES (Canonical) CC12CCC(C=C1CCC3C2CC(C4(C3(CCC4C5=COC(=O)C=C5)O)C)O)OC6C(C(C(C(O6)CO)O)O)O
SMILES (Isomeric) C[C@]12CC[C@@H](C=C1CC[C@@H]3[C@@H]2C[C@@H]([C@]4([C@@]3(CC[C@@H]4C5=COC(=O)C=C5)O)C)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O
InChI InChI=1S/C30H42O10/c1-28-9-7-17(39-27-26(36)25(35)24(34)21(13-31)40-27)11-16(28)4-5-19-20(28)12-22(32)29(2)18(8-10-30(19,29)37)15-3-6-23(33)38-14-15/h3,6,11,14,17-22,24-27,31-32,34-37H,4-5,7-10,12-13H2,1-2H3/t17-,18+,19+,20-,21+,22-,24+,25-,26+,27+,28-,29-,30-/m0/s1
InChI Key XKNRCIXILGHSLP-LWDMKCRBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H42O10
Molecular Weight 562.60 g/mol
Exact Mass 562.27779753 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP 0.20
Atomic LogP (AlogP) 0.96
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-[(3S,8R,9S,10R,12S,13S,14S,17R)-12,14-dihydroxy-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,6,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]pyran-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9321 93.21%
Caco-2 - 0.9196 91.96%
Blood Brain Barrier - 0.6400 64.00%
Human oral bioavailability - 0.9000 90.00%
Subcellular localzation Mitochondria 0.8468 84.68%
OATP2B1 inhibitior - 0.7241 72.41%
OATP1B1 inhibitior + 0.8511 85.11%
OATP1B3 inhibitior + 0.8810 88.10%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8379 83.79%
BSEP inhibitior + 0.6805 68.05%
P-glycoprotein inhibitior - 0.4301 43.01%
P-glycoprotein substrate - 0.6307 63.07%
CYP3A4 substrate + 0.7048 70.48%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8668 86.68%
CYP3A4 inhibition - 0.8299 82.99%
CYP2C9 inhibition - 0.9001 90.01%
CYP2C19 inhibition - 0.9056 90.56%
CYP2D6 inhibition - 0.9008 90.08%
CYP1A2 inhibition - 0.8479 84.79%
CYP2C8 inhibition + 0.5928 59.28%
CYP inhibitory promiscuity - 0.8364 83.64%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6106 61.06%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9421 94.21%
Skin irritation - 0.5949 59.49%
Skin corrosion - 0.9426 94.26%
Ames mutagenesis - 0.7070 70.70%
Human Ether-a-go-go-Related Gene inhibition + 0.8418 84.18%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.6397 63.97%
skin sensitisation - 0.9052 90.52%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity - 0.7322 73.22%
Acute Oral Toxicity (c) I 0.6567 65.67%
Estrogen receptor binding + 0.8502 85.02%
Androgen receptor binding + 0.7528 75.28%
Thyroid receptor binding - 0.5756 57.56%
Glucocorticoid receptor binding + 0.6620 66.20%
Aromatase binding + 0.6636 66.36%
PPAR gamma + 0.5907 59.07%
Honey bee toxicity - 0.7390 73.90%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9872 98.72%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 97.64% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.61% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.14% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 95.44% 95.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.31% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.07% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.50% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.14% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.21% 97.25%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.26% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.47% 89.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.63% 91.24%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.29% 94.00%
CHEMBL2581 P07339 Cathepsin D 83.38% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.23% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Drimia maritima

Cross-Links

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PubChem 162991352
LOTUS LTS0116781
wikiData Q105329595