5,7-dihydroxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromen-4-one

Details

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Internal ID 585f8e77-5bdd-4915-8e67-f1536d443ebe
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 5,7-dihydroxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromen-4-one
SMILES (Canonical) C1=C(C=C(C(=C1O)O)O)C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) C1=C(C=C(C(=C1O)O)O)C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)O[C@@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C21H20O13/c22-5-12-15(28)17(30)18(31)21(33-12)34-20-16(29)13-8(24)3-7(23)4-11(13)32-19(20)6-1-9(25)14(27)10(26)2-6/h1-4,12,15,17-18,21-28,30-31H,5H2/t12-,15+,17+,18-,21-/m1/s1
InChI Key FOHXFLPXBUAOJM-YUVUVMNHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H20O13
Molecular Weight 480.40 g/mol
Exact Mass 480.09039069 g/mol
Topological Polar Surface Area (TPSA) 227.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.83
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5,7-dihydroxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromen-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5116 51.16%
Caco-2 - 0.9052 90.52%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.6068 60.68%
OATP2B1 inhibitior + 0.5920 59.20%
OATP1B1 inhibitior + 0.8567 85.67%
OATP1B3 inhibitior + 0.9265 92.65%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.6924 69.24%
P-glycoprotein inhibitior - 0.6229 62.29%
P-glycoprotein substrate - 0.7677 76.77%
CYP3A4 substrate + 0.5937 59.37%
CYP2C9 substrate - 0.6709 67.09%
CYP2D6 substrate - 0.8582 85.82%
CYP3A4 inhibition - 0.9193 91.93%
CYP2C9 inhibition - 0.9296 92.96%
CYP2C19 inhibition - 0.9289 92.89%
CYP2D6 inhibition - 0.9513 95.13%
CYP1A2 inhibition - 0.9084 90.84%
CYP2C8 inhibition + 0.7905 79.05%
CYP inhibitory promiscuity - 0.7728 77.28%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7144 71.44%
Eye corrosion - 0.9930 99.30%
Eye irritation - 0.7450 74.50%
Skin irritation - 0.8036 80.36%
Skin corrosion - 0.9691 96.91%
Ames mutagenesis + 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4427 44.27%
Micronuclear + 0.6533 65.33%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.9122 91.22%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.8107 81.07%
Acute Oral Toxicity (c) III 0.4045 40.45%
Estrogen receptor binding + 0.7926 79.26%
Androgen receptor binding + 0.7137 71.37%
Thyroid receptor binding - 0.5205 52.05%
Glucocorticoid receptor binding + 0.6951 69.51%
Aromatase binding + 0.5552 55.52%
PPAR gamma + 0.6713 67.13%
Honey bee toxicity - 0.7933 79.33%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6350 63.50%
Fish aquatic toxicity + 0.8218 82.18%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.73% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.54% 89.00%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 96.15% 95.64%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.25% 94.00%
CHEMBL2581 P07339 Cathepsin D 93.15% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 91.26% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.98% 99.17%
CHEMBL3194 P02766 Transthyretin 90.79% 90.71%
CHEMBL2424 Q04760 Glyoxalase I 88.16% 91.67%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.09% 99.15%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.04% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.22% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.21% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.09% 97.09%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 81.48% 80.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.41% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia morella
Phaseolus vulgaris
Phedimus kamtschaticus

Cross-Links

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PubChem 10367864
NPASS NPC110557