(1S,3S,6R,7R,8S,9S,10S,11R,12S,13S,16S,17R)-6,9,12-trihydroxy-16-methyl-8-(2-methylpropyl)-2,4,14,19-tetraoxahexacyclo[8.7.2.01,11.03,7.07,11.013,17]nonadecane-5,15,18-trione

Details

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Internal ID 527b423c-e4b5-4334-80c6-82c359f23c3c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Diterpene lactones > Ginkgolides and bilobalides
IUPAC Name (1S,3S,6R,7R,8S,9S,10S,11R,12S,13S,16S,17R)-6,9,12-trihydroxy-16-methyl-8-(2-methylpropyl)-2,4,14,19-tetraoxahexacyclo[8.7.2.01,11.03,7.07,11.013,17]nonadecane-5,15,18-trione
SMILES (Canonical) CC1C2C(C(C34C25C(=O)OC3C(C(C46C(C(=O)OC6O5)O)CC(C)C)O)O)OC1=O
SMILES (Isomeric) C[C@H]1[C@@H]2[C@@H]([C@H]([C@@]34[C@]25C(=O)O[C@@H]3[C@H]([C@H]([C@]46[C@H](C(=O)O[C@@H]6O5)O)CC(C)C)O)O)OC1=O
InChI InChI=1S/C20H24O10/c1-5(2)4-7-9(21)13-19-11(22)10-8(6(3)14(24)27-10)20(19,16(26)28-13)30-17-18(7,19)12(23)15(25)29-17/h5-13,17,21-23H,4H2,1-3H3/t6-,7+,8+,9-,10-,11+,12-,13+,17+,18+,19+,20+/m0/s1
InChI Key CBAUUWCEZZNYTD-OOWJTCQTSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H24O10
Molecular Weight 424.40 g/mol
Exact Mass 424.13694696 g/mol
Topological Polar Surface Area (TPSA) 149.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -1.51
H-Bond Acceptor 10
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,3S,6R,7R,8S,9S,10S,11R,12S,13S,16S,17R)-6,9,12-trihydroxy-16-methyl-8-(2-methylpropyl)-2,4,14,19-tetraoxahexacyclo[8.7.2.01,11.03,7.07,11.013,17]nonadecane-5,15,18-trione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8844 88.44%
Caco-2 - 0.8338 83.38%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability + 0.6857 68.57%
Subcellular localzation Mitochondria 0.6712 67.12%
OATP2B1 inhibitior - 0.8577 85.77%
OATP1B1 inhibitior + 0.8983 89.83%
OATP1B3 inhibitior + 0.8808 88.08%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.7720 77.20%
P-glycoprotein inhibitior - 0.6027 60.27%
P-glycoprotein substrate + 0.5201 52.01%
CYP3A4 substrate + 0.6046 60.46%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8321 83.21%
CYP3A4 inhibition - 0.8643 86.43%
CYP2C9 inhibition - 0.8501 85.01%
CYP2C19 inhibition - 0.8996 89.96%
CYP2D6 inhibition - 0.9485 94.85%
CYP1A2 inhibition - 0.8921 89.21%
CYP2C8 inhibition - 0.7680 76.80%
CYP inhibitory promiscuity - 0.9471 94.71%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9843 98.43%
Carcinogenicity (trinary) Non-required 0.4913 49.13%
Eye corrosion - 0.9609 96.09%
Eye irritation - 0.8879 88.79%
Skin irritation - 0.7062 70.62%
Skin corrosion - 0.8593 85.93%
Ames mutagenesis - 0.5000 50.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6582 65.82%
Micronuclear - 0.6500 65.00%
Hepatotoxicity + 0.7343 73.43%
skin sensitisation - 0.7744 77.44%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity + 0.7338 73.38%
Acute Oral Toxicity (c) III 0.4433 44.33%
Estrogen receptor binding + 0.8111 81.11%
Androgen receptor binding + 0.7191 71.91%
Thyroid receptor binding + 0.5598 55.98%
Glucocorticoid receptor binding - 0.5212 52.12%
Aromatase binding + 0.5415 54.15%
PPAR gamma + 0.6519 65.19%
Honey bee toxicity - 0.7683 76.83%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8378 83.78%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 93.28% 90.71%
CHEMBL2581 P07339 Cathepsin D 92.25% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.16% 85.14%
CHEMBL4072 P07858 Cathepsin B 90.42% 93.67%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.30% 91.11%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 88.20% 96.38%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 87.17% 96.47%
CHEMBL4040 P28482 MAP kinase ERK2 86.50% 83.82%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.09% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.97% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.68% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 84.36% 94.73%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.11% 93.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.97% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ginkgo biloba

Cross-Links

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PubChem 154496643
LOTUS LTS0041447
wikiData Q104952154