methyl (4S,5E,6S)-5-ethylidene-4-[2-[(2E)-6-hydroxy-2,6-dimethylocta-2,7-dienoxy]-2-oxoethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

Details

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Internal ID 71d29ff2-ec48-4341-b262-a862225bf190
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (4S,5E,6S)-5-ethylidene-4-[2-[(2E)-6-hydroxy-2,6-dimethylocta-2,7-dienoxy]-2-oxoethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical) CC=C1C(C(=COC1OC2C(C(C(C(O2)CO)O)O)O)C(=O)OC)CC(=O)OCC(=CCCC(C)(C=C)O)C
SMILES (Isomeric) C/C=C/1\[C@@H](C(=CO[C@H]1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C(=O)OC)CC(=O)OC/C(=C/CCC(C)(C=C)O)/C
InChI InChI=1S/C27H40O12/c1-6-16-17(11-20(29)36-13-15(3)9-8-10-27(4,34)7-2)18(24(33)35-5)14-37-25(16)39-26-23(32)22(31)21(30)19(12-28)38-26/h6-7,9,14,17,19,21-23,25-26,28,30-32,34H,2,8,10-13H2,1,3-5H3/b15-9+,16-6+/t17-,19+,21+,22-,23+,25-,26-,27?/m0/s1
InChI Key YSTMCUNFGFHGAC-XJLCASKASA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C27H40O12
Molecular Weight 556.60 g/mol
Exact Mass 556.25197671 g/mol
Topological Polar Surface Area (TPSA) 181.00 Ų
XlogP 0.20
Atomic LogP (AlogP) 0.38
H-Bond Acceptor 12
H-Bond Donor 5
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (4S,5E,6S)-5-ethylidene-4-[2-[(2E)-6-hydroxy-2,6-dimethylocta-2,7-dienoxy]-2-oxoethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6350 63.50%
Caco-2 - 0.8489 84.89%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8179 81.79%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7537 75.37%
OATP1B3 inhibitior + 0.8557 85.57%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6271 62.71%
BSEP inhibitior + 0.8348 83.48%
P-glycoprotein inhibitior + 0.6562 65.62%
P-glycoprotein substrate + 0.5393 53.93%
CYP3A4 substrate + 0.6873 68.73%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8922 89.22%
CYP3A4 inhibition - 0.8261 82.61%
CYP2C9 inhibition - 0.8816 88.16%
CYP2C19 inhibition - 0.8665 86.65%
CYP2D6 inhibition - 0.9450 94.50%
CYP1A2 inhibition - 0.9074 90.74%
CYP2C8 inhibition + 0.7174 71.74%
CYP inhibitory promiscuity - 0.9828 98.28%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6978 69.78%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9371 93.71%
Skin irritation - 0.6421 64.21%
Skin corrosion - 0.9493 94.93%
Ames mutagenesis + 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4376 43.76%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.6986 69.86%
skin sensitisation - 0.8881 88.81%
Respiratory toxicity - 0.5778 57.78%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity + 0.5594 55.94%
Acute Oral Toxicity (c) III 0.6116 61.16%
Estrogen receptor binding + 0.7042 70.42%
Androgen receptor binding + 0.6064 60.64%
Thyroid receptor binding - 0.5450 54.50%
Glucocorticoid receptor binding + 0.6428 64.28%
Aromatase binding + 0.5346 53.46%
PPAR gamma + 0.6183 61.83%
Honey bee toxicity - 0.6816 68.16%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9297 92.97%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3401 O75469 Pregnane X receptor 96.48% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.05% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.19% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.63% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.41% 99.17%
CHEMBL2581 P07339 Cathepsin D 90.26% 98.95%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 87.85% 96.90%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.08% 96.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.01% 86.92%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.99% 89.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.20% 94.33%
CHEMBL5028 O14672 ADAM10 82.84% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Jasminum polyanthum

Cross-Links

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PubChem 10650431
LOTUS LTS0134740
wikiData Q105360667